RNA id: TU19024


Basic Information

Item Value
RNA id TU19024
length 253
lncRNA type intronic
GC content 0.40
exon number 2
gene id G14277
representative True

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 4737226 ~ 4762902 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GAGGGTTGTTGATCTTTAAAGTTAATTAAGCGTCCCAGTGACCGGTCACTCttaaaggacacacagctgggttcaggttcaggttcaggttcaggttcagacTCTGGTCTCTTCTGGGTCctgatagaaaaacacatttattgaggGTCACATGTTCAGGTAAAGTCTCCCGGcatgaaatataataataatatgaatgtGTATGTAGGCCTAATTATTAACAATCAAATGCCAATAATGCTTTACTTTCTGt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU18912 lncRNA upstream 8027 4727895 ~ 4729199 (+) True G14192
TU18941 lncRNA upstream 9112 4661262 ~ 4728114 (+) True G14208
TU18934 lncRNA upstream 33575 4684712 ~ 4703651 (+) True G14201
TU18932 lncRNA upstream 51737 4598719 ~ 4685489 (+) False G14200
TU18933 lncRNA upstream 51737 4645439 ~ 4685489 (+) True G14200
TU19026 lncRNA downstream 155 4763057 ~ 5239101 (+) True G14278
TU19031 lncRNA downstream 11595 4774497 ~ 4780297 (+) True G14280
TU19032 lncRNA downstream 17749 4780651 ~ 4798255 (+) True G14281
TU19035 lncRNA downstream 19433 4782335 ~ 5350072 (+) True G14282
TU19039 lncRNA downstream 35936 4798838 ~ 4891316 (+) True G14283
XM_039819208.1 mRNA upstream 287396 4369069 ~ 4449830 (+) True LOC120570718
XM_039778846.1 mRNA upstream 511909 4223592 ~ 4225317 (+) True LOC120544944
XM_039820085.1 mRNA upstream 537870 4185906 ~ 4199356 (+) False LOC120571237
XM_039819633.1 mRNA downstream 159185 4922087 ~ 5063976 (+) True LOC120570934
XM_039820381.1 mRNA downstream 403309 5166211 ~ 5173445 (+) True LOC120571428
XM_039820373.1 mRNA downstream 403309 5166211 ~ 5173445 (+) False LOC120571428
XM_039819884.1 mRNA downstream 456748 5219650 ~ 5230445 (+) False LOC120571154
XM_039819901.1 mRNA downstream 456748 5219650 ~ 5230445 (+) False LOC120571154
TU18942 other upstream 209849 4500173 ~ 4527377 (+) True G14209
TU18980 other upstream 316404 4367603 ~ 4420822 (+) False G14246
XR_005641110.1 other upstream 338183 4369073 ~ 4399043 (+) False LOC120570718
TU18913 other upstream 364457 4363666 ~ 4372769 (+) False LOC120570718
TU18797 other upstream 682141 4048774 ~ 4055085 (+) False G14148
TU18878 other downstream 324922 5087824 ~ 5088672 (+) False G14187
TU19140 other downstream 747855 5510757 ~ 5521881 (+) True G14344
TU19135 other downstream 750899 5513801 ~ 5518149 (+) False G14344
TU19963 other downstream 1645141 6408043 ~ 6413375 (+) False spcs2
TU19929 other downstream 1651685 6414587 ~ 6416070 (+) False spcs2

Expression Profile