RNA id: TU19032


Basic Information

Item Value
RNA id TU19032
length 200
lncRNA type intronic
GC content 0.36
exon number 2
gene id G14281
representative True

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 4780651 ~ 4798255 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

tgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtatctctgtgtgtgtgtatctctgtgtgtgtgtgtgtgtatctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtagcaggtaAAGAAATATTCTGCTGCTAGACTGCAGCTCTCTGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU19031 lncRNA upstream 354 4774497 ~ 4780297 (+) True G14280
TU19015 lncRNA upstream 5599 4702308 ~ 4775052 (+) True G14272
TU19021 lncRNA upstream 6499 4704653 ~ 4774152 (+) True G14274
TU18923 lncRNA upstream 10195 4682729 ~ 4770456 (+) True G14196
TU19024 lncRNA upstream 17749 4737226 ~ 4762902 (+) True G14277
TU19039 lncRNA downstream 583 4798838 ~ 4891316 (+) True G14283
TU18891 lncRNA downstream 3085 4801340 ~ 5064938 (+) False G14187
TU18882 lncRNA downstream 9338 4807593 ~ 4895662 (+) False G14187
TU19043 lncRNA downstream 18670 4816925 ~ 4852700 (+) True G14287
TU18869 lncRNA downstream 47658 4845913 ~ 4852355 (+) False G14187
XM_039819208.1 mRNA upstream 330821 4369069 ~ 4449830 (+) True LOC120570718
XM_039778846.1 mRNA upstream 555334 4223592 ~ 4225317 (+) True LOC120544944
XM_039820085.1 mRNA upstream 581295 4185906 ~ 4199356 (+) False LOC120571237
XM_039819633.1 mRNA downstream 123832 4922087 ~ 5063976 (+) True LOC120570934
XM_039820381.1 mRNA downstream 367956 5166211 ~ 5173445 (+) True LOC120571428
XM_039820373.1 mRNA downstream 367956 5166211 ~ 5173445 (+) False LOC120571428
XM_039819884.1 mRNA downstream 421395 5219650 ~ 5230445 (+) False LOC120571154
XM_039819901.1 mRNA downstream 421395 5219650 ~ 5230445 (+) False LOC120571154
TU18942 other upstream 253274 4500173 ~ 4527377 (+) True G14209
TU18980 other upstream 359829 4367603 ~ 4420822 (+) False G14246
XR_005641110.1 other upstream 381608 4369073 ~ 4399043 (+) False LOC120570718
TU18913 other upstream 407882 4363666 ~ 4372769 (+) False LOC120570718
TU18797 other upstream 725566 4048774 ~ 4055085 (+) False G14148
TU18878 other downstream 289569 5087824 ~ 5088672 (+) False G14187
TU19140 other downstream 712502 5510757 ~ 5521881 (+) True G14344
TU19135 other downstream 715546 5513801 ~ 5518149 (+) False G14344
TU19963 other downstream 1609788 6408043 ~ 6413375 (+) False spcs2
TU19929 other downstream 1616332 6414587 ~ 6416070 (+) False spcs2

Expression Profile