RNA id: TU19243



Basic Information


Item Value
RNA id TU19243
length 403
lncRNA type sense_over
GC content 0.66
exon number 2
gene id G14426
representative False

Chromosome Information


Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 3472937 ~ 3722632 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


cagatgataAGGAGTACGACGTGTACATCTCGTACGCGAGGAGCGGCGAGGAGGAGCAGTTTGTTCTGTCGACGCTGCGCAGCGTTCTGGAGAACGAGCTTGGGTACTCCGTGTGCATCTTCGACAGAGACAGTCTGCCGGGAGGGACCATCACAGATGAGACTCTGAGTTTCGTGGCTCGTAGCCGGCGCCTCCTGGTGGTCGTTCGCCCGGGCTACGCCTCGCAGGGCTCCCAGGCTCTGCTGGAGCTGAAGGCCGGCATCGACGGCATGGCGCGGGGCGGGCACCTGCGGGTGATCCTGGTCCAGTACAAGCCGGTGCGACGGCAGGTCTGGGTGCGGGAGCTGAGGCGGGCCCGCGTGGCCCTGGCTCTGGTTCGCTGGCAGGGGGACAAGTCCCGGGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_005641295.1 lncRNA downstream 61988 3402468 ~ 3410949 (-) True LOC120571770
TU19185 lncRNA downstream 244313 3228075 ~ 3228624 (-) False LOC120570817
TU19189 lncRNA downstream 346724 3116707 ~ 3126213 (-) True G14383
TU18611 lncRNA downstream 487363 2985324 ~ 2985574 (-) True G13997
TU18594 lncRNA downstream 492592 2977860 ~ 2980345 (-) False G13984
TU19305 lncRNA upstream 113107 3589489 ~ 3639043 (-) True G14469
TU19318 lncRNA upstream 213898 3690280 ~ 3690581 (-) True G14481
TU19261 lncRNA upstream 254218 3730600 ~ 3735025 (-) True G14428
TU19253 lncRNA upstream 254384 3730766 ~ 3735025 (-) False G14428
TU19254 lncRNA upstream 254384 3730766 ~ 3735025 (-) False G14428
XM_039820196.1 mRNA downstream 28999 3442448 ~ 3443938 (-) True LOC120571310
XM_039778724.1 mRNA downstream 30621 3441109 ~ 3442316 (-) True LOC120544846
XM_039778723.1 mRNA downstream 110553 3359156 ~ 3362384 (-) True LOC120544814
XM_039819859.1 mRNA downstream 214029 3250172 ~ 3258908 (-) True LOC120571140
XM_039820150.1 mRNA downstream 234145 3063430 ~ 3238792 (-) True LOC120571282
XM_039819291.1 mRNA upstream 93752 3570134 ~ 3587481 (-) True LOC120570764
XM_039819650.1 mRNA upstream 185618 3662000 ~ 3722671 (-) False LOC120570954
XM_039819643.1 mRNA upstream 185618 3662000 ~ 3722671 (-) True LOC120570954
XM_039820140.1 mRNA upstream 263380 3739762 ~ 3791682 (-) False LOC120571265
XM_039820131.1 mRNA upstream 263380 3739762 ~ 3769396 (-) False LOC120571265
XR_005638367.1 other downstream 79900 3392932 ~ 3393037 (-) True LOC120554328
unassigned_transcript_82 other downstream 114740 3358125 ~ 3358197 (-) True trnav-aac
XR_005638528.1 other downstream 124319 3348428 ~ 3348618 (-) True LOC120554594
XR_005638534.1 other downstream 125817 3346933 ~ 3347120 (-) True LOC120554609
XR_005638559.1 other downstream 143298 3329453 ~ 3329639 (-) True LOC120554673
TU19241 other upstream 228523 3704905 ~ 3722632 (-) True G14426
TU19429 other upstream 1050158 4526540 ~ 4672863 (-) False G14552
TU19448 other upstream 1050158 4526540 ~ 4577885 (-) False G14552
TU19473 other upstream 1050158 4526540 ~ 4822250 (-) False G14552
TU19430 other upstream 1257867 4734249 ~ 4763971 (-) False G14552

Expression Profile