RNA id: TU19356



Basic Information


Item Value
RNA id TU19356
length 313
lncRNA type inter_gene
GC content 0.43
exon number 2
gene id G14499
representative False

Chromosome Information


Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 3782051 ~ 3874216 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GGGGACCAAAGTCAGTCTGGTCTGTTCCTGTCTGGGCAGTGTGGACTGGCAGTTGGTTTATGAACATTCTAAAGACGACCAACTGACAactttagaatgttggagtttgttggagcggtgtgcaaactacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaggtacgatacacacacacacacacacacacacacacacacagacacacacacatacacacacacacacacacacacacacacacac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU19262 lncRNA downstream 103498 3730766 ~ 3763944 (-) False G14428
TU19261 lncRNA downstream 132417 3730600 ~ 3735025 (-) True G14428
TU19365 lncRNA upstream 15507 3889723 ~ 3890506 (-) True G14508
XR_005641287.1 lncRNA upstream 49919 3924135 ~ 3932809 (-) True LOC120571752
TU19350 lncRNA upstream 66501 3940717 ~ 3992111 (-) False LOC120544895
TU19332 lncRNA upstream 154524 4028740 ~ 4034170 (-) False LOC120571085
TU19333 lncRNA upstream 154524 4028740 ~ 4055084 (-) False LOC120571085
XM_039820140.1 mRNA downstream 75760 3739762 ~ 3791682 (-) False LOC120571265
XM_039820131.1 mRNA downstream 98046 3739762 ~ 3769396 (-) False LOC120571265
XM_039820125.1 mRNA downstream 112102 3739762 ~ 3755340 (-) True LOC120571265
XM_039819650.1 mRNA downstream 144771 3662000 ~ 3722671 (-) False LOC120570954
XM_039819643.1 mRNA downstream 144771 3662000 ~ 3722671 (-) True LOC120570954
XM_039778759.1 mRNA upstream 25237 3899453 ~ 4015956 (-) True LOC120544895
XM_039819729.1 mRNA upstream 47566 3921782 ~ 3923856 (-) True LOC120571031
XM_039819781.1 mRNA upstream 159184 4033400 ~ 4047789 (-) False LOC120571085
XM_039778771.1 mRNA upstream 177976 4052192 ~ 4078128 (-) True LOC120544902
XM_039778784.1 mRNA upstream 213960 4088176 ~ 4138553 (-) True LOC120544909
TU19241 other downstream 144810 3704905 ~ 3722632 (-) True G14426
XR_005638367.1 other downstream 474405 3392932 ~ 3393037 (-) True LOC120554328
unassigned_transcript_82 other downstream 509245 3358125 ~ 3358197 (-) True trnav-aac
XR_005638528.1 other downstream 518824 3348428 ~ 3348618 (-) True LOC120554594
XR_005638534.1 other downstream 520322 3346933 ~ 3347120 (-) True LOC120554609
TU19429 other upstream 652324 4526540 ~ 4672863 (-) False G14552
TU19448 other upstream 652324 4526540 ~ 4577885 (-) False G14552
TU19473 other upstream 652324 4526540 ~ 4822250 (-) False G14552
TU19430 other upstream 860033 4734249 ~ 4763971 (-) False G14552
TU19434 other upstream 860033 4734249 ~ 4779090 (-) False G14552

Expression Profile