RNA id: TU19365



Basic Information


Item Value
RNA id TU19365
length 242
lncRNA type inter_gene
GC content 0.50
exon number 2
gene id G14508
representative True

Chromosome Information


Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 3889723 ~ 3890506 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gtgcacagaatggtcgacgcactttcacctgcacccatcaggaaacgggagaaagctttgaagtgggacgtatgaagttatgtccacaactacgagggtggggctgaggggtttgacccctgttgatctgtgtgtgtcatatcaccaacccatgatagctagaattcaccctgctactccagatctacctgctgtatggctggctacagactacaaccatctgctccagatctacctactgt

Function


GO: NA

KEGG:

id description
ko04113 Meiosis - yeast

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU19355 lncRNA downstream 15507 3782051 ~ 3874216 (-) True G14499
TU19356 lncRNA downstream 15507 3867442 ~ 3874216 (-) False G14499
TU19364 lncRNA downstream 18038 3871402 ~ 3871685 (-) True G14507
TU19352 lncRNA downstream 18988 3868894 ~ 3870735 (-) True G14496
TU19262 lncRNA downstream 125779 3730766 ~ 3763944 (-) False G14428
XR_005641287.1 lncRNA upstream 33629 3924135 ~ 3932809 (-) True LOC120571752
TU19350 lncRNA upstream 50211 3940717 ~ 3992111 (-) False LOC120544895
TU19332 lncRNA upstream 138234 4028740 ~ 4034170 (-) False LOC120571085
TU19333 lncRNA upstream 138234 4028740 ~ 4055084 (-) False LOC120571085
TU19335 lncRNA upstream 138234 4028740 ~ 4034170 (-) True LOC120571085
XM_039820140.1 mRNA downstream 98041 3739762 ~ 3791682 (-) False LOC120571265
XM_039820131.1 mRNA downstream 120327 3739762 ~ 3769396 (-) False LOC120571265
XM_039820125.1 mRNA downstream 134383 3739762 ~ 3755340 (-) True LOC120571265
XM_039819650.1 mRNA downstream 167052 3662000 ~ 3722671 (-) False LOC120570954
XM_039819643.1 mRNA downstream 167052 3662000 ~ 3722671 (-) True LOC120570954
XM_039778759.1 mRNA upstream 8947 3899453 ~ 4015956 (-) True LOC120544895
XM_039819729.1 mRNA upstream 31276 3921782 ~ 3923856 (-) True LOC120571031
XM_039819781.1 mRNA upstream 142894 4033400 ~ 4047789 (-) False LOC120571085
XM_039778771.1 mRNA upstream 161686 4052192 ~ 4078128 (-) True LOC120544902
XM_039778784.1 mRNA upstream 197670 4088176 ~ 4138553 (-) True LOC120544909
TU19241 other downstream 167091 3704905 ~ 3722632 (-) True G14426
XR_005638367.1 other downstream 496686 3392932 ~ 3393037 (-) True LOC120554328
unassigned_transcript_82 other downstream 531526 3358125 ~ 3358197 (-) True trnav-aac
XR_005638528.1 other downstream 541105 3348428 ~ 3348618 (-) True LOC120554594
XR_005638534.1 other downstream 542603 3346933 ~ 3347120 (-) True LOC120554609
TU19429 other upstream 636034 4526540 ~ 4672863 (-) False G14552
TU19448 other upstream 636034 4526540 ~ 4577885 (-) False G14552
TU19473 other upstream 636034 4526540 ~ 4822250 (-) False G14552
TU19430 other upstream 843743 4734249 ~ 4763971 (-) False G14552
TU19434 other upstream 843743 4734249 ~ 4779090 (-) False G14552

Expression Profile