RNA id: TU19403



Basic Information


Item Value
RNA id TU19403
length 341
lncRNA type inter_gene
GC content 0.33
exon number 1
gene id G14541
representative True

Chromosome Information


Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 4227501 ~ 4227841 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gtaattaatGGAAATTCATATATTTACCTATAAACAATAATTCTACACATATTACACATTGTTCAATGTAAACCCAGATTATGAATTAATTGCACTGTTGTTATCTGTACCTCTGGAATATAGTTTCTTTGAACATCTTTTTAAATTGGAATATGTTTggacattgttttaattaattacTTAGTGTGTTCCACAATTTAGTGCCGCTGACAGATAGACAGAAACTTCTCCTTGTAGTGCGAAAACTGGGAGTCTTAAAATTTGACTTTCCCCTCAAGTCATAGCCCCCCTCTCTTTCaaaatattttctgtatgtTGCCAGGCAATAAATTGTTTCTCGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_005641301.1 lncRNA downstream 4910 4217324 ~ 4222591 (-) True LOC120571793
TU19385 lncRNA downstream 79423 4147700 ~ 4148078 (-) True G14526
TU19382 lncRNA downstream 94359 4130024 ~ 4133142 (-) True G14524
TU19378 lncRNA downstream 105837 4121353 ~ 4121664 (-) True G14521
TU19374 lncRNA downstream 125179 4094359 ~ 4102322 (-) True G14517
TU19587 lncRNA upstream 81611 4309452 ~ 4336344 (-) True G14595
TU19535 lncRNA upstream 84433 4312274 ~ 4312765 (-) True G14554
TU19589 lncRNA upstream 85615 4313456 ~ 4321725 (-) True G14597
TU19542 lncRNA upstream 108912 4336753 ~ 4475637 (-) True G14557
TU19536 lncRNA upstream 114041 4341882 ~ 4376961 (-) True G14555
XM_039778784.1 mRNA downstream 88948 4088176 ~ 4138553 (-) True LOC120544909
XM_039778771.1 mRNA downstream 149373 4052192 ~ 4078128 (-) True LOC120544902
XM_039819781.1 mRNA downstream 179712 4033400 ~ 4047789 (-) False LOC120571085
XM_039778759.1 mRNA downstream 211545 3899453 ~ 4015956 (-) True LOC120544895
XM_039819516.1 mRNA upstream 433773 4661614 ~ 5252192 (-) False LOC120570840
XM_039819499.1 mRNA upstream 433773 4661614 ~ 5252186 (-) False LOC120570840
XM_039819491.1 mRNA upstream 433773 4661614 ~ 5252186 (-) False LOC120570840
XM_039819466.1 mRNA upstream 433773 4661614 ~ 5252186 (-) False LOC120570840
XM_039819552.1 mRNA upstream 433773 4661614 ~ 5252186 (-) False LOC120570840
TU19241 other downstream 504869 3704905 ~ 3722632 (-) True G14426
XR_005638367.1 other downstream 834464 3392932 ~ 3393037 (-) True LOC120554328
unassigned_transcript_82 other downstream 869304 3358125 ~ 3358197 (-) True trnav-aac
XR_005638528.1 other downstream 878883 3348428 ~ 3348618 (-) True LOC120554594
XR_005638534.1 other downstream 880381 3346933 ~ 3347120 (-) True LOC120554609
TU19429 other upstream 298699 4526540 ~ 4672863 (-) False G14552
TU19448 other upstream 298699 4526540 ~ 4577885 (-) False G14552
TU19473 other upstream 298699 4526540 ~ 4822250 (-) False G14552
TU19430 other upstream 506408 4734249 ~ 4763971 (-) False G14552
TU19434 other upstream 506408 4734249 ~ 4779090 (-) False G14552

Expression Profile