RNA id: TU19570


Basic Information

Item Value
RNA id TU19570
length 952
RNA type TUCP
GC content 0.49
exon number 2
gene id G14579
representative True

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 5062988 ~ 5111979 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

CCGAACCAGAACCCAggatagagaggctgagtgaatgtggtgttgaaggtgtggaggtggatcagtgagtcagaggagactgtgtagaaggacagagagccagcaggacagtccacatacactgctactctaccagagacagaggaggaggagatgtctgctactctaccagagacagaggagggaggaggagatgtctgctactctaccagagacagaggaggaggagatgtctgctactctaccagagacagaggaggaggagatgtctgctactctaccagagacagaggaggaggagatggatgtttGTCTGTTATTGTGCCAGACAGAGTAACGACCATCAGAGCAGtccagactccaggactgatcattccatccaaacacacagtcaagactgtttcctctcctgctgattcctctgtaactcactgatatatcaACATCTCCTCTCGTCTCCActtcccagtaacagcgaccagtcagaccatctctacacagcagctgaggccaggagtcaaacctctctggatgatcaggatatggctgatcctcctccacacgtgtcaccttcctgttgttgtcagacagtttgaggtttctgttcactgtgtttgtgtccagtgtgagttcacaggaatctgacggagagaaggagacacaacacagctgcagttattaaccaatcagcactttgatgatgacatcagagggttgaatgagtgatgtcacagtttgatgaatgaaattaaaaacacacttacacttcctcagacctggtgtcaaatatctgactccagcaggctccaccctgaaaggagggggggcattacatcactcagaaagagagagagaagaagaaaagtagacatgttctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgggtgtgtgtgtgtgtg

Function

GO: NA

KEGG:

id description
ko04060 Cytokine-cytokine receptor interaction

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU19666 lncRNA downstream 365 4988567 ~ 5062623 (-) True G14666
TU19668 lncRNA downstream 20699 4989659 ~ 5042289 (-) True G14667
TU19665 lncRNA downstream 27900 4988001 ~ 5035088 (-) True G14665
TU19548 lncRNA downstream 48882 4868426 ~ 5014106 (-) True G14559
TU19560 lncRNA downstream 56213 4914105 ~ 5006775 (-) True G14569
TU19569 lncRNA upstream 14227 5126206 ~ 5126588 (-) True G14578
TU19688 lncRNA upstream 30238 5142217 ~ 5142560 (-) True G14685
TU19692 lncRNA upstream 40785 5152764 ~ 5153977 (-) True G14687
TU19529 lncRNA upstream 47351 5159330 ~ 5160191 (-) False G14553
TU19694 lncRNA upstream 60178 5172157 ~ 5172941 (-) True G14688
XM_039820686.1 mRNA downstream 87406 4949179 ~ 4975582 (-) True LOC120571626
XM_039819571.1 mRNA downstream 299572 4661614 ~ 4763416 (-) False LOC120570840
XM_039819436.1 mRNA downstream 299572 4661614 ~ 4763416 (-) False LOC120570840
XM_039819445.1 mRNA downstream 299572 4661614 ~ 4763416 (-) False LOC120570840
XM_039819427.1 mRNA downstream 299572 4661614 ~ 4763416 (-) False LOC120570840
XM_039778857.1 mRNA upstream 141015 5252994 ~ 5267295 (-) True LOC120544953
XM_039819337.1 mRNA upstream 189826 5301805 ~ 5326758 (-) True LOC120570786
XM_039784725.1 mRNA upstream 353971 5465950 ~ 5472587 (-) True LOC120548458
XM_039778893.1 mRNA upstream 365001 5476980 ~ 5484148 (-) True LOC120544977
XM_039793120.1 mRNA upstream 378011 5489990 ~ 5510035 (-) False LOC120554300
TU19473 other downstream 240738 4526540 ~ 4822250 (-) False G14552
TU19434 other downstream 283898 4734249 ~ 4779090 (-) False G14552
TU19430 other downstream 299017 4734249 ~ 4763971 (-) False G14552
TU19455 other downstream 299017 4734249 ~ 4763971 (-) False G14552
TU19480 other downstream 299017 4734249 ~ 4763971 (-) False G14552
TU19530 other upstream 102790 5214769 ~ 5305369 (-) True G14553
TU19742 other upstream 377277 5489256 ~ 5503430 (-) True LOC120554300
TU19757 other upstream 398737 5510716 ~ 5533827 (-) False G14722
TU19803 other upstream 591408 5703387 ~ 5705977 (-) True G14754
TU19916 other upstream 1190370 6302349 ~ 6302812 (-) True G14853

Expression Profile