RNA id: TU19631



Basic Information


Item Value
RNA id TU19631
length 346
lncRNA type inter_gene
GC content 0.47
exon number 2
gene id G14635
representative True

Chromosome Information


Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 4602273 ~ 4650049 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


actatgGAAACggaccaaatgatgcctgtttcttgtacagtaatagcgttactgaaggctagctctatctccatagttacgttactccaagcttcttctcttgtgaacacctccgctcttcactcttcacacactacgctccgatctgtttaccttttcctgctacaactgaggACTTCAGCGCCAGACTACAGCCTTCTGTAacgctagttactttacaagaaacaggcaccATTACCATGacaaccatacacacacacacacacacacacacacacacacacagacacacacacaggtacgacacacacacacacacacacacacaggtacgacacacacacac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU19494 lncRNA downstream 27414 4573040 ~ 4574859 (-) False G14552
TU19421 lncRNA downstream 30747 4526074 ~ 4571526 (-) False G14552
XR_005641267.1 lncRNA downstream 33550 4565920 ~ 4568723 (-) True LOC120571696
TU19627 lncRNA downstream 51628 4550342 ~ 4550645 (-) True G14631
TU19487 lncRNA downstream 62919 4537404 ~ 4539354 (-) False G14552
TU19579 lncRNA upstream 32348 4682397 ~ 4775530 (-) True G14588
TU19504 lncRNA upstream 32683 4682732 ~ 4770870 (-) False G14552
TU19425 lncRNA upstream 34661 4684710 ~ 4784281 (-) False G14552
TU19432 lncRNA upstream 34661 4684710 ~ 4685605 (-) False G14552
TU19635 lncRNA upstream 43251 4693300 ~ 4711579 (-) True G14637
XM_039778784.1 mRNA downstream 463720 4088176 ~ 4138553 (-) True LOC120544909
XM_039778771.1 mRNA downstream 524145 4052192 ~ 4078128 (-) True LOC120544902
XM_039819781.1 mRNA downstream 554484 4033400 ~ 4047789 (-) False LOC120571085
XM_039778759.1 mRNA downstream 586317 3899453 ~ 4015956 (-) True LOC120544895
XM_039819516.1 mRNA upstream 11565 4661614 ~ 5252192 (-) False LOC120570840
XM_039819499.1 mRNA upstream 11565 4661614 ~ 5252186 (-) False LOC120570840
XM_039819491.1 mRNA upstream 11565 4661614 ~ 5252186 (-) False LOC120570840
XM_039819466.1 mRNA upstream 11565 4661614 ~ 5252186 (-) False LOC120570840
XM_039819552.1 mRNA upstream 11565 4661614 ~ 5252186 (-) False LOC120570840
TU19448 other downstream 24388 4526540 ~ 4577885 (-) False G14552
TU19241 other downstream 879641 3704905 ~ 3722632 (-) True G14426
XR_005638367.1 other downstream 1209236 3392932 ~ 3393037 (-) True LOC120554328
unassigned_transcript_82 other downstream 1244076 3358125 ~ 3358197 (-) True trnav-aac
XR_005638528.1 other downstream 1253655 3348428 ~ 3348618 (-) True LOC120554594
TU19430 other upstream 84200 4734249 ~ 4763971 (-) False G14552
TU19434 other upstream 84200 4734249 ~ 4779090 (-) False G14552
TU19455 other upstream 84200 4734249 ~ 4763971 (-) False G14552
TU19476 other upstream 84200 4734249 ~ 4734696 (-) False G14552
TU19480 other upstream 84200 4734249 ~ 4763971 (-) False G14552

Expression Profile