RNA id: TU19634



Basic Information


Item Value
RNA id TU19634
length 213
lncRNA type inter_gene
GC content 0.70
exon number 2
gene id G14636
representative False

Chromosome Information


Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 4639163 ~ 4640044 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CCCACAGACCGGGGCTTCAGCACGTCGCGTCCCCCACAGACCGGGGCTTCAGCACGTCGcgtcctccagagaccggggcttCAGCACGTCGcgtcctccagagaccggggcttCAGCACGTCGcgtcctccagagaccggggcttCAGCACGTCGcgtcctccagagaccggggcttCAGCACGTCGcgtccCCCACAGACCGGGGCTTCCGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_005641268.1 lncRNA downstream 5526 4630275 ~ 4634119 (-) True LOC120571703
XR_005641280.1 lncRNA downstream 15112 4599848 ~ 4624533 (-) True LOC120571732
TU19630 lncRNA downstream 28658 4602138 ~ 4610987 (-) True G14634
TU19494 lncRNA downstream 64786 4573040 ~ 4574859 (-) False G14552
TU19421 lncRNA downstream 68119 4526074 ~ 4571526 (-) False G14552
TU19579 lncRNA upstream 42353 4682397 ~ 4775530 (-) True G14588
TU19504 lncRNA upstream 42688 4682732 ~ 4770870 (-) False G14552
TU19425 lncRNA upstream 44666 4684710 ~ 4784281 (-) False G14552
TU19432 lncRNA upstream 44666 4684710 ~ 4685605 (-) False G14552
TU19635 lncRNA upstream 53256 4693300 ~ 4711579 (-) True G14637
XM_039778784.1 mRNA downstream 501092 4088176 ~ 4138553 (-) True LOC120544909
XM_039778771.1 mRNA downstream 561517 4052192 ~ 4078128 (-) True LOC120544902
XM_039819781.1 mRNA downstream 591856 4033400 ~ 4047789 (-) False LOC120571085
XM_039778759.1 mRNA downstream 623689 3899453 ~ 4015956 (-) True LOC120544895
XM_039819516.1 mRNA upstream 21570 4661614 ~ 5252192 (-) False LOC120570840
XM_039819499.1 mRNA upstream 21570 4661614 ~ 5252186 (-) False LOC120570840
XM_039819491.1 mRNA upstream 21570 4661614 ~ 5252186 (-) False LOC120570840
XM_039819466.1 mRNA upstream 21570 4661614 ~ 5252186 (-) False LOC120570840
XM_039819552.1 mRNA upstream 21570 4661614 ~ 5252186 (-) False LOC120570840
TU19448 other downstream 61760 4526540 ~ 4577885 (-) False G14552
TU19241 other downstream 917013 3704905 ~ 3722632 (-) True G14426
XR_005638367.1 other downstream 1246608 3392932 ~ 3393037 (-) True LOC120554328
unassigned_transcript_82 other downstream 1281448 3358125 ~ 3358197 (-) True trnav-aac
XR_005638528.1 other downstream 1291027 3348428 ~ 3348618 (-) True LOC120554594
TU19430 other upstream 94205 4734249 ~ 4763971 (-) False G14552
TU19434 other upstream 94205 4734249 ~ 4779090 (-) False G14552
TU19455 other upstream 94205 4734249 ~ 4763971 (-) False G14552
TU19476 other upstream 94205 4734249 ~ 4734696 (-) False G14552
TU19480 other upstream 94205 4734249 ~ 4763971 (-) False G14552