RNA id: TU19643



Basic Information


Item Value
RNA id TU19643
length 361
lncRNA type intronic
GC content 0.40
exon number 2
gene id G14644
representative True

Chromosome Information


Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 4787573 ~ 4788302 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


cGTGTtatcagagttagctgttgttttagcagtgttagctgttgtgttagcagagttagctgttgtgttagcagaggtagctgttgtgttagtaaagttagctgttgtgtaagCAGAGTTTTCTGctttgttagcagagttagctgttgtgttagcataattagctgttgtgttagctgttgtgttagaggagttagctgttgtgttaccataactagctgttgtgttagcagagtttgctgctttgttagcagagttagctgttgtgttagcataattagctgttgtgttagctgttgtgttagaggagttagctgttgtgttaccaTAACTAggtgttgtgttagcagagttagaagtt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU19493 lncRNA downstream 3292 4564604 ~ 4784281 (-) False G14552
TU19425 lncRNA downstream 3292 4684710 ~ 4784281 (-) False G14552
TU19572 lncRNA downstream 6472 4768650 ~ 4781101 (-) True G14581
TU19640 lncRNA downstream 7163 4779995 ~ 4780410 (-) True G14641
TU19427 lncRNA downstream 7711 4598719 ~ 4779862 (-) False G14552
TU19537 lncRNA upstream 20264 4808566 ~ 5113100 (-) True G14556
TU19538 lncRNA upstream 20264 4808566 ~ 5064938 (-) False G14556
TU19648 lncRNA upstream 23174 4811476 ~ 4894053 (-) True G14649
TU19491 lncRNA upstream 38043 4826345 ~ 4865243 (-) False G14552
TU19552 lncRNA upstream 63214 4851516 ~ 4989880 (-) True G14562
XM_039819571.1 mRNA downstream 24157 4661614 ~ 4763416 (-) False LOC120570840
XM_039819436.1 mRNA downstream 24157 4661614 ~ 4763416 (-) False LOC120570840
XM_039819445.1 mRNA downstream 24157 4661614 ~ 4763416 (-) False LOC120570840
XM_039819427.1 mRNA downstream 24157 4661614 ~ 4763416 (-) False LOC120570840
XM_039819451.1 mRNA downstream 49661 4661614 ~ 4737912 (-) False LOC120570840
XM_039820686.1 mRNA upstream 160877 4949179 ~ 4975582 (-) True LOC120571626
XM_039778857.1 mRNA upstream 464692 5252994 ~ 5267295 (-) True LOC120544953
XM_039819337.1 mRNA upstream 513503 5301805 ~ 5326758 (-) True LOC120570786
XM_039784725.1 mRNA upstream 677648 5465950 ~ 5472587 (-) True LOC120548458
XM_039778893.1 mRNA upstream 688678 5476980 ~ 5484148 (-) True LOC120544977
TU19434 other downstream 8483 4734249 ~ 4779090 (-) False G14552
TU19430 other downstream 23602 4734249 ~ 4763971 (-) False G14552
TU19455 other downstream 23602 4734249 ~ 4763971 (-) False G14552
TU19480 other downstream 23602 4734249 ~ 4763971 (-) False G14552
TU19476 other downstream 52877 4734249 ~ 4734696 (-) False G14552
TU19570 other upstream 274686 5062988 ~ 5111979 (-) True G14579
TU19530 other upstream 426467 5214769 ~ 5305369 (-) True G14553
TU19742 other upstream 700954 5489256 ~ 5503430 (-) True LOC120554300
TU19757 other upstream 722414 5510716 ~ 5533827 (-) False G14722
TU19803 other upstream 915085 5703387 ~ 5705977 (-) True G14754

Expression Profile