RNA id: TU19665


Basic Information

Item Value
RNA id TU19665
length 472
lncRNA type intronic
GC content 0.34
exon number 2
gene id G14665
representative True

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 4988001 ~ 5035088 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtctgtgtgtgtctgtgtgtgtgtatcgtacctgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtctttgtgtgtctgtgtgaatctgtgtatctgactgtgtgtgtgtctgtatgtgtgtgtgtgtttgtgtgtacatcgtagctgtgtgtgtctatgtgtgtgtctgtgtgtttgtgtgtacatcgtagctgtgtgtgtctatgtgtgtgtctgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtcgtacctgtgtgtgtgtgcatgtgtgtgtgtttgtgtgtgtgtgtgtgtgtatcgtacctgtgtgagtgcgtgtgtgtatgtgtgtgtgtgtctgtgtgtatctgtttgtgtgtctgtctttatgtgtgtgtgtgtgtgtatccatttgtgtgtctgtgtgtctctgtgtgtgtcgctgtctgtgtgtgcgtgtttgtgtgtgtatctgtgatgtatgt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU19574 lncRNA downstream 31587 4955652 ~ 4956414 (-) True G14583
TU19549 lncRNA downstream 32565 4950325 ~ 4955436 (-) True G14560
TU19662 lncRNA downstream 48839 4938840 ~ 4939162 (-) True G14662
TU19545 lncRNA downstream 60930 4925084 ~ 4927071 (-) False G14559
TU19568 lncRNA downstream 73252 4865312 ~ 4914749 (-) True G14577
TU19680 lncRNA upstream 55231 5090319 ~ 5094729 (-) True G14679
TU19569 lncRNA upstream 91118 5126206 ~ 5126588 (-) True G14578
TU19688 lncRNA upstream 107129 5142217 ~ 5142560 (-) True G14685
TU19692 lncRNA upstream 117676 5152764 ~ 5153977 (-) True G14687
TU19529 lncRNA upstream 124242 5159330 ~ 5160191 (-) False G14553
XM_039820686.1 mRNA downstream 12419 4949179 ~ 4975582 (-) True LOC120571626
XM_039819571.1 mRNA downstream 224585 4661614 ~ 4763416 (-) False LOC120570840
XM_039819436.1 mRNA downstream 224585 4661614 ~ 4763416 (-) False LOC120570840
XM_039819445.1 mRNA downstream 224585 4661614 ~ 4763416 (-) False LOC120570840
XM_039819427.1 mRNA downstream 224585 4661614 ~ 4763416 (-) False LOC120570840
XM_039778857.1 mRNA upstream 217906 5252994 ~ 5267295 (-) True LOC120544953
XM_039819337.1 mRNA upstream 266717 5301805 ~ 5326758 (-) True LOC120570786
XM_039784725.1 mRNA upstream 430862 5465950 ~ 5472587 (-) True LOC120548458
XM_039778893.1 mRNA upstream 441892 5476980 ~ 5484148 (-) True LOC120544977
XM_039793120.1 mRNA upstream 454902 5489990 ~ 5510035 (-) False LOC120554300
TU19473 other downstream 165751 4526540 ~ 4822250 (-) False G14552
TU19434 other downstream 208911 4734249 ~ 4779090 (-) False G14552
TU19430 other downstream 224030 4734249 ~ 4763971 (-) False G14552
TU19455 other downstream 224030 4734249 ~ 4763971 (-) False G14552
TU19480 other downstream 224030 4734249 ~ 4763971 (-) False G14552
TU19570 other upstream 27900 5062988 ~ 5111979 (-) True G14579
TU19530 other upstream 179681 5214769 ~ 5305369 (-) True G14553
TU19742 other upstream 454168 5489256 ~ 5503430 (-) True LOC120554300
TU19757 other upstream 475628 5510716 ~ 5533827 (-) False G14722
TU19803 other upstream 668299 5703387 ~ 5705977 (-) True G14754

Expression Profile