RNA id: TU19692



Basic Information


Item Value
RNA id TU19692
length 318
lncRNA type intronic
GC content 0.53
exon number 2
gene id G14687
representative True

Chromosome Information


Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 5152764 ~ 5153977 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


ATTcttcagtgtgcagtgtggactcttcagtccaacacagatcagcttccctcctgaatcctgcaggttgttgtttcTCAGGTCCAggtctctcagactagaggactgagagctgagaactgaggacaaaCCTTCACAGCTTCTCTACAGGTTACATCCACTCAGTCTGAGATTCTttagtgtgcagtgtggactcttcagtccaacacagatcagcttccctcctgaatcctgcaggttgttgtttcTCAGGTCCAggtctctcagactagaggactgggagctgagaactgaggacaaaGCTTCACAGCTTTTCTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU19688 lncRNA downstream 10204 5142217 ~ 5142560 (-) True G14685
TU19569 lncRNA downstream 26176 5126206 ~ 5126588 (-) True G14578
TU19537 lncRNA downstream 39664 4808566 ~ 5113100 (-) True G14556
TU19680 lncRNA downstream 58035 5090319 ~ 5094729 (-) True G14679
TU19538 lncRNA downstream 87826 4808566 ~ 5064938 (-) False G14556
TU19529 lncRNA upstream 5353 5159330 ~ 5160191 (-) False G14553
TU19694 lncRNA upstream 18180 5172157 ~ 5172941 (-) True G14688
TU19526 lncRNA upstream 38911 5192888 ~ 5350376 (-) False G14553
TU19511 lncRNA upstream 39433 5193410 ~ 5278400 (-) False G14553
TU19524 lncRNA upstream 39433 5193410 ~ 5278472 (-) False G14553
XM_039820686.1 mRNA downstream 177182 4949179 ~ 4975582 (-) True LOC120571626
XM_039819571.1 mRNA downstream 389348 4661614 ~ 4763416 (-) False LOC120570840
XM_039819436.1 mRNA downstream 389348 4661614 ~ 4763416 (-) False LOC120570840
XM_039819445.1 mRNA downstream 389348 4661614 ~ 4763416 (-) False LOC120570840
XM_039819427.1 mRNA downstream 389348 4661614 ~ 4763416 (-) False LOC120570840
XM_039778857.1 mRNA upstream 99017 5252994 ~ 5267295 (-) True LOC120544953
XM_039819337.1 mRNA upstream 147828 5301805 ~ 5326758 (-) True LOC120570786
XM_039784725.1 mRNA upstream 311973 5465950 ~ 5472587 (-) True LOC120548458
XM_039778893.1 mRNA upstream 323003 5476980 ~ 5484148 (-) True LOC120544977
XM_039793120.1 mRNA upstream 336013 5489990 ~ 5510035 (-) False LOC120554300
TU19570 other downstream 40785 5062988 ~ 5111979 (-) True G14579
TU19434 other downstream 373674 4734249 ~ 4779090 (-) False G14552
TU19530 other upstream 60792 5214769 ~ 5305369 (-) True G14553
TU19742 other upstream 335279 5489256 ~ 5503430 (-) True LOC120554300
TU19757 other upstream 356739 5510716 ~ 5533827 (-) False G14722
TU19803 other upstream 549410 5703387 ~ 5705977 (-) True G14754
TU19916 other upstream 1148372 6302349 ~ 6302812 (-) True G14853

Expression Profile