RNA id: TU19694



Basic Information


Item Value
RNA id TU19694
length 656
lncRNA type intronic
GC content 0.40
exon number 2
gene id G14688
representative True

Chromosome Information


Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 5172157 ~ 5172941 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gtctctctacatactactctctactgctgtctctctacatactgctctctactgctgtctctctacatactactctctactgttgtctctctacatactactctctactgttgtctctctacatactactctctactgttgtctctctacatactactctactgttgtctctctacatactactctctctacatactactctctactgttgtctctctacatactactctctactgttgtctctctacatactactctctactgttgtctctctacatactactctctactgttgtctctctacatactactctctactgttgtctctctacatactactctctactgttgtctctctacatactactctctctacatactactctctactgttgtctctctacatactactctctactgttgtctctctacatactactctctactactgtctctctacatactactctctactgttgtctctctacatactactctctactgttgtctctctacatactactctctactgttgtctctctacatactactctctactactgtctctctacatactactctctactgttgtctctctacatactactctacatactactctctactgctgtctctctacatactactctctactg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU19529 lncRNA downstream 11966 5159330 ~ 5160191 (-) False G14553
TU19692 lncRNA downstream 18180 5152764 ~ 5153977 (-) True G14687
TU19688 lncRNA downstream 29597 5142217 ~ 5142560 (-) True G14685
TU19569 lncRNA downstream 45569 5126206 ~ 5126588 (-) True G14578
TU19537 lncRNA downstream 59057 4808566 ~ 5113100 (-) True G14556
TU19526 lncRNA upstream 19947 5192888 ~ 5350376 (-) False G14553
TU19511 lncRNA upstream 20469 5193410 ~ 5278400 (-) False G14553
TU19524 lncRNA upstream 20469 5193410 ~ 5278472 (-) False G14553
XR_005641260.1 lncRNA upstream 20486 5193427 ~ 5212174 (-) True LOC120571674
TU19697 lncRNA upstream 32937 5205878 ~ 5356586 (-) False G14690
XM_039820686.1 mRNA downstream 196575 4949179 ~ 4975582 (-) True LOC120571626
XM_039819571.1 mRNA downstream 408741 4661614 ~ 4763416 (-) False LOC120570840
XM_039819436.1 mRNA downstream 408741 4661614 ~ 4763416 (-) False LOC120570840
XM_039819445.1 mRNA downstream 408741 4661614 ~ 4763416 (-) False LOC120570840
XM_039819427.1 mRNA downstream 408741 4661614 ~ 4763416 (-) False LOC120570840
XM_039778857.1 mRNA upstream 80053 5252994 ~ 5267295 (-) True LOC120544953
XM_039819337.1 mRNA upstream 128864 5301805 ~ 5326758 (-) True LOC120570786
XM_039784725.1 mRNA upstream 293009 5465950 ~ 5472587 (-) True LOC120548458
XM_039778893.1 mRNA upstream 304039 5476980 ~ 5484148 (-) True LOC120544977
XM_039793120.1 mRNA upstream 317049 5489990 ~ 5510035 (-) False LOC120554300
TU19570 other downstream 60178 5062988 ~ 5111979 (-) True G14579
TU19434 other downstream 393067 4734249 ~ 4779090 (-) False G14552
TU19530 other upstream 41828 5214769 ~ 5305369 (-) True G14553
TU19742 other upstream 316315 5489256 ~ 5503430 (-) True LOC120554300
TU19757 other upstream 337775 5510716 ~ 5533827 (-) False G14722
TU19803 other upstream 530446 5703387 ~ 5705977 (-) True G14754
TU19916 other upstream 1129408 6302349 ~ 6302812 (-) True G14853

Expression Profile