RNA id: TU20046



Basic Information


Item Value
RNA id TU20046
length 214
lncRNA type inter_gene
GC content 0.42
exon number 2
gene id G14925
representative True

Chromosome Information


Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 6476774 ~ 6477418 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


ggttaaggttagcgtaagggttaaggttaggcatttagttgtgatggttaaggtgagggtaagggttaaggttaggcatttagttgtgatggttaaggtcagggtaagggttaaggttaggcatttagttgtgatggttaaggttagggtaagggttaaggttaggcattcagttgtgatggttaaggttagggtaagggttaaggttaggcat

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU20044 lncRNA downstream 18907 6457398 ~ 6457867 (-) True G14923
TU20007 lncRNA downstream 57888 6403857 ~ 6418886 (-) True G14890
TU19984 lncRNA downstream 59214 6390614 ~ 6417560 (-) True G14880
TU20058 lncRNA upstream 89119 6566537 ~ 6566808 (-) True G14937
TU20061 lncRNA upstream 100820 6578238 ~ 6578461 (-) True G14940
TU20064 lncRNA upstream 131539 6608957 ~ 6609212 (-) True G14943
TU20070 lncRNA upstream 228171 6705589 ~ 6706293 (-) True G14949
XR_005637424.1 lncRNA upstream 325474 6802892 ~ 6803621 (-) True LOC120549739
XM_039779510.1 mRNA downstream 8994 6466848 ~ 6467780 (-) True LOC120545295
XM_039792160.1 mRNA downstream 34076 6441772 ~ 6442698 (-) True LOC120553580
XM_039780301.1 mRNA downstream 83550 6387490 ~ 6393224 (-) False lipt2
XM_039779548.1 mRNA upstream 5573 6482991 ~ 6484025 (-) True LOC120545304
XM_039779658.1 mRNA upstream 68673 6546091 ~ 6547017 (-) True LOC120545387
XM_039779852.1 mRNA upstream 268762 6746180 ~ 6751981 (-) True LOC120545488
XM_039779893.1 mRNA upstream 301757 6779175 ~ 6780104 (-) True LOC120545506
XM_039779906.1 mRNA upstream 342729 6820147 ~ 6822230 (-) True LOC120545509
TU19916 other downstream 173962 6302349 ~ 6302812 (-) True G14853
TU19803 other downstream 770797 5703387 ~ 5705977 (-) True G14754
TU19757 other downstream 942947 5510716 ~ 5533827 (-) False G14722
TU19742 other downstream 973344 5489256 ~ 5503430 (-) True LOC120554300
TU19530 other downstream 1171405 5214769 ~ 5305369 (-) True G14553
TU20278 other upstream 543565 7020983 ~ 7032467 (-) False atg16l2
TU20279 other upstream 543565 7020983 ~ 7032467 (-) False atg16l2
XR_005638460.1 other upstream 564664 7042082 ~ 7042373 (-) True LOC120554469
TU20319 other upstream 624948 7102366 ~ 7104090 (-) True G15110
TU20324 other upstream 634281 7111699 ~ 7113608 (-) True G15114

Expression Profile