Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU20569 |
| length | 665 |
| lncRNA type | intronic |
| GC content | 0.45 |
| exon number | 2 |
| gene id | G15266 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053113.1 |
| NCBI id | CM020910.1 |
| chromosome length | 48524041 |
| location | 7835175 ~ 7835918 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0005911 | cell-cell junction | cellular_component |
| GO:0005921 | gap junction | cellular_component |
| GO:0005922 | connexin complex | cellular_component |
| GO:0030054 | cell junction | cellular_component |
| id | description |
|---|---|
| ko00830 | Retinol metabolism |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU20554 | lncRNA | upstream | 34285 | 7779257 ~ 7800890 (+) | True | G15262 |
| TU20529 | lncRNA | upstream | 89184 | 7667142 ~ 7745991 (+) | True | G15243 |
| TU20490 | lncRNA | upstream | 293249 | 7495060 ~ 7541926 (+) | True | G15236 |
| TU20411 | lncRNA | upstream | 375637 | 7425440 ~ 7459538 (+) | True | G15179 |
| TU20576 | lncRNA | downstream | 3551 | 7839469 ~ 7839994 (+) | True | G15273 |
| TU20557 | lncRNA | downstream | 11826 | 7847744 ~ 7853429 (+) | True | rffl |
| TU20566 | lncRNA | downstream | 17609 | 7853527 ~ 7857191 (+) | True | G15265 |
| TU20578 | lncRNA | downstream | 36498 | 7872416 ~ 7900015 (+) | True | G15275 |
| TU20556 | lncRNA | downstream | 46284 | 7882202 ~ 7892473 (+) | False | LOC120543711 |
| XM_039777073.1 | mRNA | upstream | 7088 | 7826643 ~ 7828087 (+) | True | LOC120543808 |
| XM_039776795.1 | mRNA | upstream | 144103 | 7679029 ~ 7691072 (+) | True | LOC120543651 |
| XM_039777304.1 | mRNA | upstream | 178256 | 7642554 ~ 7656919 (+) | False | eif4h |
| XM_039776883.1 | mRNA | downstream | 22135 | 7858053 ~ 7886305 (+) | True | LOC120543711 |
| XM_039788213.1 | mRNA | downstream | 279467 | 8115385 ~ 8118646 (+) | True | LOC120551067 |
| XM_039777293.1 | mRNA | downstream | 287707 | 8123625 ~ 8125669 (+) | True | LOC120543907 |
| XM_039788241.1 | mRNA | downstream | 408713 | 8244631 ~ 8307210 (+) | True | LOC120551081 |
| XM_039776949.1 | mRNA | downstream | 563482 | 8399400 ~ 8422336 (+) | True | nyap2a |
| TU20573 | other | upstream | 7885 | 7826610 ~ 7827290 (+) | False | LOC120543808 |
| TU20486 | other | upstream | 343118 | 7491365 ~ 7492057 (+) | True | G15234 |
| unassigned_transcript_83 | other | upstream | 423263 | 7411830 ~ 7411912 (+) | True | trnal-cag |
| TU20402 | other | upstream | 436034 | 7398101 ~ 7399141 (+) | True | G15173 |
| TU20165 | other | upstream | 845779 | 6972845 ~ 6989396 (+) | True | G15019 |
| TU20561 | other | downstream | 131 | 7836049 ~ 7843657 (+) | False | rffl |
| TU20798 | other | downstream | 334778 | 8170696 ~ 8172491 (+) | True | G15415 |
| TU20801 | other | downstream | 334778 | 8170696 ~ 8171775 (+) | False | G15415 |
| XR_005636425.1 | other | downstream | 960152 | 8796070 ~ 8808829 (+) | False | LOC120544007 |
| XR_005636426.1 | other | downstream | 960152 | 8796070 ~ 8808770 (+) | True | LOC120544007 |
