RNA id: TU21137


Basic Information

Item Value
RNA id TU21137
length 268
lncRNA type inter_gene
GC content 0.49
exon number 2
gene id G15619
representative True

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 9589607 ~ 9590143 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

acagacacacacacacacacacacacacacacacacacacaaacagacacacacacacacacacacaaagacacaaacagacacacacacacagacacacacacacacacacaaacagacacacacacacagacacacacacacacacacaccaacacacacacacacgcacagacacccacagacacaccaacacacacacacacacacacacacacaaacagacacacacacacacacacacacacacacacacaaacagacacac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU21160 lncRNA upstream 53014 9533530 ~ 9536593 (+) True G15637
TU21159 lncRNA upstream 57150 9531026 ~ 9532457 (+) True G15636
TU21158 lncRNA upstream 62377 9526584 ~ 9527230 (+) True G15635
TU21134 lncRNA upstream 63540 9524915 ~ 9526067 (+) True G15616
TU21149 lncRNA upstream 83479 9485101 ~ 9506128 (+) True G15629
TU21178 lncRNA downstream 8170 9598313 ~ 9599219 (+) False G15640
TU21162 lncRNA downstream 10363 9600506 ~ 9655663 (+) True G15638
TU21197 lncRNA downstream 16556 9606699 ~ 9607045 (+) True G15657
TU21195 lncRNA downstream 29109 9619252 ~ 9635945 (+) True G15655
TU21191 lncRNA downstream 37664 9627807 ~ 9630249 (+) False G15653
XM_039788344.1 mRNA upstream 34991 9544019 ~ 9554616 (+) True LOC120551143
XM_039777519.1 mRNA upstream 150776 9434649 ~ 9438831 (+) True serp1
XM_039777024.1 mRNA upstream 250439 9331567 ~ 9339168 (+) True LOC120543784
XM_039777036.1 mRNA upstream 260095 9309207 ~ 9329512 (+) False LOC120543792
XM_039777044.1 mRNA upstream 260095 9324963 ~ 9329512 (+) True LOC120543792
XM_039783389.1 mRNA downstream 13117 9603260 ~ 9625781 (+) True LOC120547748
XM_039788367.1 mRNA downstream 44131 9634274 ~ 9652831 (+) True LOC120551159
XM_039780891.1 mRNA downstream 160488 9750631 ~ 9797726 (+) True clip3
XM_039780892.1 mRNA downstream 160488 9750631 ~ 9797726 (+) False clip3
XM_039788424.1 mRNA downstream 363409 9953552 ~ 9976502 (+) True LOC120551195
TU21147 other upstream 130390 9458478 ~ 9459217 (+) True G15628
TU21111 other upstream 211403 9374154 ~ 9378204 (+) True G15605
TU21065 other upstream 234979 9272899 ~ 9354628 (+) True G15572
TU21053 other upstream 467315 9113842 ~ 9122292 (+) True G15565
TU21037 other upstream 507199 9040559 ~ 9082408 (+) False G15552
TU21177 other downstream 8817 9598960 ~ 9669529 (+) True G15640
TU21174 other downstream 41248 9631391 ~ 9636479 (+) False LOC120551159
TU21176 other downstream 44161 9634304 ~ 9636479 (+) False LOC120551159
TU21175 other downstream 44300 9634443 ~ 9636479 (+) False LOC120551159
TU21180 other downstream 54994 9645137 ~ 9668479 (+) True G15642

Expression Profile