RNA id: TU21195


Basic Information

Item Value
RNA id TU21195
length 241
lncRNA type read_through
GC content 0.49
exon number 2
gene id G15655
representative True

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 9619252 ~ 9635945 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtgtgtgtgtttgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgactgtgtgtgtgtgtgtgtgtgtctgactgtgtgtgtgtgtgtgtgtgtctgac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU21197 lncRNA upstream 12207 9606699 ~ 9607045 (+) True G15657
TU21081 lncRNA upstream 19395 9465146 ~ 9599857 (+) True G15577
TU21178 lncRNA upstream 20033 9598313 ~ 9599219 (+) False G15640
TU21137 lncRNA upstream 29109 9589607 ~ 9590143 (+) True G15619
TU21160 lncRNA upstream 82659 9533530 ~ 9536593 (+) True G15637
TU21200 lncRNA downstream 28056 9664001 ~ 9664312 (+) True G15660
TU21203 lncRNA downstream 44222 9680167 ~ 9680904 (+) True G15662
TU21212 lncRNA downstream 49071 9685016 ~ 9685361 (+) True G15666
TU21216 lncRNA downstream 56458 9692403 ~ 9693478 (+) True G15668
TU21234 lncRNA downstream 175901 9811846 ~ 9812132 (+) True G15684
XM_039788344.1 mRNA upstream 64636 9544019 ~ 9554616 (+) True LOC120551143
XM_039777519.1 mRNA upstream 180421 9434649 ~ 9438831 (+) True serp1
XM_039777024.1 mRNA upstream 280084 9331567 ~ 9339168 (+) True LOC120543784
XM_039777036.1 mRNA upstream 289740 9309207 ~ 9329512 (+) False LOC120543792
XM_039780891.1 mRNA downstream 114686 9750631 ~ 9797726 (+) True clip3
XM_039780892.1 mRNA downstream 114686 9750631 ~ 9797726 (+) False clip3
XM_039788424.1 mRNA downstream 317607 9953552 ~ 9976502 (+) True LOC120551195
XM_039779289.1 mRNA downstream 420049 10055994 ~ 10119839 (+) True si:ch211-137a8.4
XM_039779298.1 mRNA downstream 420924 10056869 ~ 10119839 (+) False si:ch211-137a8.4
TU21147 other upstream 160035 9458478 ~ 9459217 (+) True G15628
TU21111 other upstream 241048 9374154 ~ 9378204 (+) True G15605
TU21065 other upstream 264624 9272899 ~ 9354628 (+) True G15572
TU21053 other upstream 496960 9113842 ~ 9122292 (+) True G15565
TU21037 other upstream 536844 9040559 ~ 9082408 (+) False G15552
TU21180 other downstream 9192 9645137 ~ 9668479 (+) True G15642
unassigned_transcript_86 other downstream 233888 9869833 ~ 9869924 (+) True trnar-ucu_10
unassigned_transcript_87 other downstream 248568 9884513 ~ 9884604 (+) True trnar-ucu_11
TU21262 other downstream 249668 9885613 ~ 9944445 (+) False LOC120551195
TU21264 other downstream 324121 9960066 ~ 9965774 (+) False LOC120551195

Expression Profile