RNA id: XM_039777012.1


Basic Information

Item Value
RNA id XM_039777012.1
length 2972
RNA type mRNA
GC content 0.49
exon number 11
gene id spint2
representative True

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 8880438 ~ 8914977 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

CGTGGCCTCACCTGCCGCCCAGGTGAATATATCTGCGCCATCAGAAGCAGGAAGTGCTTTAGTTCCCTGTTGTCTCGTCTATTGATGTCCAAGATGATGCAGCGCGTGTCTCTGCTGTTACTCTGCCTCCTGCTCGCTACCGGGCCGGCTCTGGCTCTGGACTGCGCCTGGGACCCGGATGTAGACCCGGACCAGGCTCTGGACCCGGTGTCCCTGGCCTCCGTGCTACTGCAGGGCCAGAACAACACCGTGGAGGGATCGGACCCGCGGCTGTGCCGCGAGGCCTGCTGTCAGACCGCGGGCTGCGACCTGGCGCTGCTCGGCTTCCCCATGGATGGACTGCCGCAGTGCATGCTGGTCCAGTGCGTGCGCCAGGGCCGGGACATGTGCGTGTATCGACCCAGCACGCAGTTCAAGATTTACCGCAAGAAAGTTCCGACAGACGCCGAGACAAAGAACCAGGAGGGCGGGGAGGAACTGCGCGTCGTCCCGCTGGTGGTGCTGGGAGAAACcaaccagacagacaacaTCCGTTGCCGGCTGCCGATGAAGGTGGGCTCGTGCCGTGCAGCCTTCCCCAGGTTCTACTACGATgtgaccaatcagagctgtcGAGGCTTCACCTACGGAGGCTGTGACGCCAACGAAAACCACTTTGAGTCCAGGGAGGAGTGTGAGGCTAGCTGCAGCGGAgtcacaggttcaGTTCTTCCCGATGAGTCGACCCCTGCTCCTGATCTTCCTCCCAAAGCTCGGCGCCTGGCCCCCTTCGACTCCAaaGTGTCTGATGAAGGTGTTGAGTCTGAAGCAGATCCAGAGGCTCAGAAGACAGAAAAGGCCGCTGATGACTTCGCTGAGCGCTGCGGGGCGGAGCCTGATGGCGGTAACTGCAGAGCGGCGTTTCAGCACTGGTACTACAACAGCAAGACAGGAAGCTGTCAGACCTTCCTGTACGGAGGCTGCCAAGGAAATAAGAACAACTACTTCACCGAGAAGGAGTGCATCGCTGCCTgcacagTCCAAGTGCTTCCCTCCTCCAAGAAAGacgctgatgatgatgatgatgaagtttCTGCAGAATACAGAGatagcTGCatggtgacctctgaccccGGGCCCTGCCGTGCTGCATTCCCCATGTTCTACTACGACAGCAGCACCTCCTCCTGCCAGATGTTCATGTATGGAGGTTGTCACGGCAACAACAACCGCTACAGCAGCGCGGAGGAGTGCCTGAGCCGCTGCAGCAACGCTTCCTTTGATGCTCATGGAAACCCTCGCAAACACCTGACTACAGctgtctTCATGTTCGTCACTCTGGCAGCCGtctctgctctgctgctggCGGCGCTCGGCGTCCTCACGCTGAGACGCCACCGTCTGTCCCGCAGCACGTCCCCTGCCAGTGATAAGGAGGAGCTGCTTCCTGAAGATGATCATTCTTCTCTGGAGTCTCTGAGCGCCCCGGGCAGCCCCAAACTGGACAATGCCTAAAATGAGGGGGGTCCACCCTGTGGGGTTAGGATTAGGGGTTCACCCCGGGGGTCCACATCTTTAACCCGCTATACTCTGGattctctctgcagacagaaGAGTTGTATGTGTCCTCTGTCCTCACTCGCTGCCTACGGTGATTCAATGATAAGTTAGGGAACACAAAGGATCCATTAAATCACTTTAAACTGTCATTTGAAGTCATTTATTACGTCTGTTTTCAGGGTCACACAGAATCTGCCCACACAGAACTTTCCTCAGATttgaaacttaaaaataaaactctgaatgtcaaaacatccaaacagaaaaacagtaCGCTAAGTACTGCAGATTTCCTATTAAAGTTTATGGGGAAATGTAGCACCGTTTTTGCGATTTTCCTGAGAACCGCTAGCAAAGTCATAGCACAACATTCCTGATCACTCCGCatgttttgatgtattttttgCGTGTGTGTTGGCAAAGCTGCGCGACTAGTagtgtgacaaaaaatgtggcCGAACATGAAGAACCAGAATATTAAGTATGACTAATAGTCAGTGTGCCGATGCAGGCTGCTACTGCGTCACATCGGCACACTGACTAAATCTAAACTCAGAATGTTAAAACATCTCCACAGAAAACGGTGAAATAGTCACGCTAAATTCTGCCGCTTTACATTCTGGATCAGCGCTGAAAACTGTAAGAACATGGGCAGATTCTGTTGGGCTCTGTTTATGAGTTAGGGAACAGAAATTAAGAATCAAGTTAGTTTAAACTGTCATTAGAAATCATTTCTTAAGTTAAAACTTGTGATTACTTTTAGTGTGGAGTTAATATAAAGTCTGTTTATAACGTTGTGTTAATGTTTAAAAGGTCACTTGTCTTTTTATATCTTCTGGGTGGGACAgttcaatgtgtttttaatcaGTTTTACGCTGCCAGAGAGCAGAATATTAAAATCAGGGAGGGCAAACCGACGTCAGAGCTTTGAAGCAGCCAAGACATGGAGCCTTCGTTTCCCAGAATGCAACATGACTCGTTGGCTCCCCCTGCAGGCTGAAAACTACTGCCTCTTTCTGATATGTGATCCATTactgatttattgatttattaaaggggagacacacacacacacacacacacacacacagtgacaaacATGCAGCAGCTTTTATTTAGTAGTAAATCAGACACTCTTTAAGGATCCAACTCGGGATTTTAATAATCCATATCGTATCATTCTAACCTTAGGAAACACTCCCATCTTTGATTTTAGGATTAAAGGGATCCAACAGCTGtcgcttgttgttgttgttgttgttgttgtttttcagattCTGATGCAGAGTTTAAATCTAAAGTTAGATTGTGTTTTATTGATCGTCATTGATGTGATCAGTTTTACAGCTCTCTGTTCTGTGATTAATGATTTAAGACGATGTAATGATGGGGTTGATGTATTTGAAACTATCAATAAACTTTAACACCTTTTA

Function

GO: NA

KEGG:

id description
K23421 SPINT2; Kunitz-type protease inhibitor 2

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU21444 lncRNA downstream 78498 8801446 ~ 8801978 (-) True G15826
TU21432 lncRNA downstream 101934 8778030 ~ 8778542 (-) True G15819
TU21422 lncRNA downstream 129528 8750411 ~ 8750948 (-) True G15812
TU21419 lncRNA downstream 136130 8735489 ~ 8744346 (-) True G15809
TU21457 lncRNA upstream 3047 8918024 ~ 8920817 (-) True G15836
TU21477 lncRNA upstream 54305 8969282 ~ 8970613 (-) True G15851
TU21437 lncRNA upstream 58286 8973263 ~ 9046433 (-) False G15820
TU21479 lncRNA upstream 66211 8981188 ~ 8983921 (-) True G15853
TU21480 lncRNA upstream 66211 8981188 ~ 8983921 (-) False G15853
XM_039776983.1 mRNA downstream 430 8849490 ~ 8880046 (-) False atg16l1
XM_039776975.1 mRNA downstream 430 8849490 ~ 8880046 (-) True atg16l1
XM_039777139.1 mRNA downstream 39100 8828413 ~ 8841376 (-) True LOC120543840
XM_039778440.1 mRNA downstream 138433 8692074 ~ 8742043 (-) True LOC120544569
XM_039777372.1 mRNA downstream 195992 8682663 ~ 8684484 (-) True LOC120543940
XM_039777467.1 mRNA upstream 6459 8921436 ~ 8923366 (-) True LOC120543996
XM_039776768.1 mRNA upstream 216007 9130984 ~ 9158835 (-) True LOC120543625
XM_039788278.1 mRNA upstream 281010 9195987 ~ 9201417 (-) True LOC120551100
XM_039777568.1 mRNA upstream 433232 9348209 ~ 9433655 (-) True eif2a
XM_039777530.1 mRNA upstream 573345 9488322 ~ 9502894 (-) True LOC120544027
XR_005638456.1 other downstream 5856 8874341 ~ 8874620 (-) True LOC120554459
XR_005638457.1 other downstream 19836 8860361 ~ 8860640 (-) True LOC120554461
XR_005638459.1 other downstream 25884 8854312 ~ 8854592 (-) True LOC120554466
TU21363 other downstream 277586 8602072 ~ 8602890 (-) True G15771
TU21348 other downstream 410716 8468357 ~ 8469760 (-) True G15757
TU21433 other upstream 56937 8971914 ~ 9046433 (-) True G15820
TU21489 other upstream 216562 9131539 ~ 9144120 (-) False LOC120543625
TU21546 other upstream 322990 9237967 ~ 9238784 (-) True G15903
TU21567 other upstream 515884 9430861 ~ 9433602 (-) False eif2a
TU21571 other upstream 598527 9513504 ~ 9517970 (-) False LOC120551129

Expression Profile