RNA id: TU21567



Basic Information


Item Value
RNA id TU21567
length 341
RNA type TUCP
GC content 0.57
exon number 5
gene id eif2a
representative False

Chromosome Information


Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 9348209 ~ 9433655 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GGGAGACGGCCTTCCTTCTTCCCGGCACACGTAAACATGGCGCCCCCCATCCCTCTGCTAGCAGtgcGTGGATCAGATGGTACGGCTCTGCTCTCTGGTCCTCCCACATGTGAGGAACACTCATCCTTCcagagggACTCCAGGAGCAGCAGGTGTGTGACCTTCAGCAGAGATGGGACTCTGTTCGGCTGGTGCAACGGACAAAAtgtcTCCGTGGTGAAGTCTTCAGACGTCTCCGTGGTAACCTCCCTAAATCTCCCGAAGACGTCTCTGTTGGACATCTCTCCTCTCAACACCATCCTGGTCACCTGGCAACCGTACAGCAaggccTAGGACAGTGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU21593 lncRNA downstream 28157 9401797 ~ 9402704 (-) True G15947
XR_005636441.1 lncRNA downstream 33646 9387091 ~ 9397215 (-) False LOC120544080
TU21592 lncRNA downstream 34024 9386675 ~ 9396837 (-) True LOC120544080
TU21590 lncRNA downstream 67717 9362605 ~ 9363144 (-) True G15945
TU21560 lncRNA downstream 83774 9322759 ~ 9347087 (-) True G15916
TU21575 lncRNA upstream 4160 9437762 ~ 9445079 (-) True G15930
TU21584 lncRNA upstream 73450 9507052 ~ 9514168 (-) True G15939
TU21587 lncRNA upstream 80739 9514341 ~ 9514991 (-) True G15942
TU21606 lncRNA upstream 111977 9545579 ~ 9546034 (-) False G15952
TU21607 lncRNA upstream 111977 9545579 ~ 9585942 (-) False G15952
XM_039788278.1 mRNA downstream 229444 9195987 ~ 9201417 (-) True LOC120551100
XM_039776768.1 mRNA downstream 272026 9130984 ~ 9158835 (-) True LOC120543625
XM_039777467.1 mRNA downstream 507495 8921436 ~ 8923366 (-) True LOC120543996
XM_039777012.1 mRNA downstream 515884 8880476 ~ 8914977 (-) True spint2
XM_039776975.1 mRNA downstream 550815 8849490 ~ 8880046 (-) True atg16l1
XM_039777530.1 mRNA upstream 54720 9488322 ~ 9502894 (-) True LOC120544027
XM_039788319.1 mRNA upstream 79874 9513476 ~ 9522231 (-) True LOC120551129
XM_039788333.1 mRNA upstream 90605 9524207 ~ 9531095 (-) True LOC120551135
XM_039777124.1 mRNA upstream 97419 9531021 ~ 9543141 (-) True LOC120543835
XM_039788379.1 mRNA upstream 243233 9676835 ~ 9680842 (-) True LOC120551163
TU21546 other downstream 192077 9237967 ~ 9238784 (-) True G15903
TU21489 other downstream 286741 9131539 ~ 9144120 (-) False LOC120543625
TU21433 other downstream 384428 8971914 ~ 9046433 (-) True G15820
XR_005638456.1 other downstream 556241 8874341 ~ 8874620 (-) True LOC120554459
XR_005638457.1 other downstream 570221 8860361 ~ 8860640 (-) True LOC120554461
TU21571 other upstream 79902 9513504 ~ 9517970 (-) False LOC120551129
XR_005638376.1 other upstream 198321 9631923 ~ 9632028 (-) True LOC120554346
TU21765 other upstream 703086 10136688 ~ 10138347 (-) True G16066
TU21762 other upstream 706574 10140176 ~ 10149571 (-) True G16064
TU21797 other upstream 892651 10326253 ~ 10330847 (-) False LOC120574316

Expression Profile