RNA id: TU21575



Basic Information


Item Value
RNA id TU21575
length 312
lncRNA type inter_gene
GC content 0.56
exon number 2
gene id G15930
representative True

Chromosome Information


Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 9437762 ~ 9445079 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtgggaggggccagtgtgtgtgtgttgttgattGGTGTGTGTGCAGGATAGGCTGCCAGAGTTCAGGAATGTCGCGGTGcgttcagggcctgtgggagaGACGCGACGCGCTGCAGTCTGAAGATGTTGTTTCGGGGTTTGTCAGCCGCTCGACGTCGAGGCTCCGCCCCCCCTGCTGTGACATCACGGTGACATCACTACATGCCCATCCTGATGCTCTGGATGATCTGGAAGATGg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU21593 lncRNA downstream 35058 9401797 ~ 9402704 (-) True G15947
XR_005636441.1 lncRNA downstream 40547 9387091 ~ 9397215 (-) False LOC120544080
TU21592 lncRNA downstream 40925 9386675 ~ 9396837 (-) True LOC120544080
TU21590 lncRNA downstream 74618 9362605 ~ 9363144 (-) True G15945
TU21560 lncRNA downstream 90675 9322759 ~ 9347087 (-) True G15916
TU21584 lncRNA upstream 61973 9507052 ~ 9514168 (-) True G15939
TU21587 lncRNA upstream 69262 9514341 ~ 9514991 (-) True G15942
TU21606 lncRNA upstream 100500 9545579 ~ 9546034 (-) False G15952
TU21607 lncRNA upstream 100500 9545579 ~ 9585942 (-) False G15952
TU21616 lncRNA upstream 100500 9545579 ~ 9546034 (-) True G15952
XM_039777568.1 mRNA downstream 4107 9348209 ~ 9433655 (-) True eif2a
XM_039788278.1 mRNA downstream 236345 9195987 ~ 9201417 (-) True LOC120551100
XM_039776768.1 mRNA downstream 278927 9130984 ~ 9158835 (-) True LOC120543625
XM_039777467.1 mRNA downstream 514396 8921436 ~ 8923366 (-) True LOC120543996
XM_039777012.1 mRNA downstream 522785 8880476 ~ 8914977 (-) True spint2
XM_039777530.1 mRNA upstream 43243 9488322 ~ 9502894 (-) True LOC120544027
XM_039788319.1 mRNA upstream 68397 9513476 ~ 9522231 (-) True LOC120551129
XM_039788333.1 mRNA upstream 79128 9524207 ~ 9531095 (-) True LOC120551135
XM_039777124.1 mRNA upstream 85942 9531021 ~ 9543141 (-) True LOC120543835
XM_039788379.1 mRNA upstream 231756 9676835 ~ 9680842 (-) True LOC120551163
TU21567 other downstream 4160 9430861 ~ 9433602 (-) False eif2a
TU21546 other downstream 198978 9237967 ~ 9238784 (-) True G15903
TU21489 other downstream 293642 9131539 ~ 9144120 (-) False LOC120543625
TU21433 other downstream 391329 8971914 ~ 9046433 (-) True G15820
XR_005638456.1 other downstream 563142 8874341 ~ 8874620 (-) True LOC120554459
TU21571 other upstream 68425 9513504 ~ 9517970 (-) False LOC120551129
XR_005638376.1 other upstream 186844 9631923 ~ 9632028 (-) True LOC120554346
TU21765 other upstream 691609 10136688 ~ 10138347 (-) True G16066
TU21762 other upstream 695097 10140176 ~ 10149571 (-) True G16064
TU21797 other upstream 881174 10326253 ~ 10330847 (-) False LOC120574316

Expression Profile