RNA id: TU21584



Basic Information


Item Value
RNA id TU21584
length 364
lncRNA type sense_over
GC content 0.50
exon number 2
gene id G15939
representative True

Chromosome Information


Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 9507052 ~ 9514168 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


tctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtctctctgtgtgtgtgtgtgtgtctctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctctctgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtctctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtctgtgtgtgtgtgtgtgtgtctctgtgtgtctgtgtgtgtgtgtgtg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU21575 lncRNA downstream 61973 9437762 ~ 9445079 (-) True G15930
TU21573 lncRNA downstream 68210 9411493 ~ 9438842 (-) True G15928
TU21593 lncRNA downstream 104348 9401797 ~ 9402704 (-) True G15947
XR_005636441.1 lncRNA downstream 109837 9387091 ~ 9397215 (-) False LOC120544080
TU21592 lncRNA downstream 110215 9386675 ~ 9396837 (-) True LOC120544080
TU21587 lncRNA upstream 173 9514341 ~ 9514991 (-) True G15942
TU21606 lncRNA upstream 31411 9545579 ~ 9546034 (-) False G15952
TU21607 lncRNA upstream 31411 9545579 ~ 9585942 (-) False G15952
TU21616 lncRNA upstream 31411 9545579 ~ 9546034 (-) True G15952
TU21617 lncRNA upstream 31411 9545579 ~ 9546034 (-) False G15952
XM_039777530.1 mRNA downstream 4158 9488322 ~ 9502894 (-) True LOC120544027
XM_039777568.1 mRNA downstream 73397 9348209 ~ 9433655 (-) True eif2a
XM_039788278.1 mRNA downstream 305635 9195987 ~ 9201417 (-) True LOC120551100
XM_039776768.1 mRNA downstream 348217 9130984 ~ 9158835 (-) True LOC120543625
XM_039777467.1 mRNA downstream 583686 8921436 ~ 8923366 (-) True LOC120543996
XM_039788333.1 mRNA upstream 10039 9524207 ~ 9531095 (-) True LOC120551135
XM_039777124.1 mRNA upstream 16853 9531021 ~ 9543141 (-) True LOC120543835
XM_039788379.1 mRNA upstream 162667 9676835 ~ 9680842 (-) True LOC120551163
XM_039788414.1 mRNA upstream 333830 9847998 ~ 9851668 (-) True dharma
XM_039824593.1 mRNA upstream 639723 10153891 ~ 10178798 (-) False zgc:162698
TU21567 other downstream 73450 9430861 ~ 9433602 (-) False eif2a
TU21546 other downstream 268268 9237967 ~ 9238784 (-) True G15903
TU21489 other downstream 362932 9131539 ~ 9144120 (-) False LOC120543625
TU21433 other downstream 460619 8971914 ~ 9046433 (-) True G15820
XR_005638456.1 other downstream 632432 8874341 ~ 8874620 (-) True LOC120554459
XR_005638376.1 other upstream 117755 9631923 ~ 9632028 (-) True LOC120554346
TU21765 other upstream 622520 10136688 ~ 10138347 (-) True G16066
TU21762 other upstream 626008 10140176 ~ 10149571 (-) True G16064
TU21797 other upstream 812085 10326253 ~ 10330847 (-) False LOC120574316
TU21879 other upstream 907894 10422062 ~ 10424770 (-) True G16143

Expression Profile