RNA id: TU21617



Basic Information


Item Value
RNA id TU21617
length 201
lncRNA type inter_gene
GC content 0.48
exon number 3
gene id G15952
representative False

Chromosome Information


Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 9545579 ~ 9585942 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


NNAGATTACAATGACCTTTACCATGTAACTAGTAACTCCCCAACACAGGTAGTAGATTACAATGACCTTTACCATGTAACTAGTAACTCCCCAACACAGGTAATAGATTACAATGACCTTTACCATGTAACTAGTAACTCCCCAACACAGGTAATAGATTACAATGACCTTTACCATGTAACTAGTAACTCCCCAACACAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU21587 lncRNA downstream 30588 9514341 ~ 9514991 (-) True G15942
TU21584 lncRNA downstream 31411 9507052 ~ 9514168 (-) True G15939
TU21575 lncRNA downstream 100500 9437762 ~ 9445079 (-) True G15930
TU21573 lncRNA downstream 106737 9411493 ~ 9438842 (-) True G15928
TU21593 lncRNA downstream 142875 9401797 ~ 9402704 (-) True G15947
TU21620 lncRNA upstream 8970 9555004 ~ 9669466 (-) True G15953
TU21622 lncRNA upstream 8970 9555004 ~ 9615438 (-) False G15953
TU21621 lncRNA upstream 52517 9598551 ~ 9599226 (-) False G15953
TU21578 lncRNA upstream 54518 9600552 ~ 9655660 (-) True G15933
TU21629 lncRNA upstream 79810 9625844 ~ 9629605 (-) True G15958
XM_039777124.1 mRNA downstream 2438 9531021 ~ 9543141 (-) True LOC120543835
XM_039788333.1 mRNA downstream 14484 9524207 ~ 9531095 (-) True LOC120551135
XM_039788319.1 mRNA downstream 23348 9513476 ~ 9522231 (-) True LOC120551129
XM_039777530.1 mRNA downstream 42685 9488322 ~ 9502894 (-) True LOC120544027
XM_039777568.1 mRNA downstream 111924 9348209 ~ 9433655 (-) True eif2a
XM_039788379.1 mRNA upstream 130801 9676835 ~ 9680842 (-) True LOC120551163
XM_039788414.1 mRNA upstream 301964 9847998 ~ 9851668 (-) True dharma
XM_039824593.1 mRNA upstream 607857 10153891 ~ 10178798 (-) False zgc:162698
XM_039824587.1 mRNA upstream 607857 10153891 ~ 10178795 (-) True zgc:162698
XM_039824601.1 mRNA upstream 638499 10184533 ~ 10201584 (-) False LOC120574297
TU21571 other downstream 27609 9513504 ~ 9517970 (-) False LOC120551129
TU21567 other downstream 111977 9430861 ~ 9433602 (-) False eif2a
TU21546 other downstream 306795 9237967 ~ 9238784 (-) True G15903
TU21489 other downstream 401459 9131539 ~ 9144120 (-) False LOC120543625
TU21433 other downstream 499146 8971914 ~ 9046433 (-) True G15820
XR_005638376.1 other upstream 85889 9631923 ~ 9632028 (-) True LOC120554346
TU21765 other upstream 590654 10136688 ~ 10138347 (-) True G16066
TU21762 other upstream 594142 10140176 ~ 10149571 (-) True G16064
TU21797 other upstream 780219 10326253 ~ 10330847 (-) False LOC120574316
TU21879 other upstream 876028 10422062 ~ 10424770 (-) True G16143

Expression Profile