RNA id: TU21620


Basic Information

Item Value
RNA id TU21620
length 486
lncRNA type inter_gene
GC content 0.50
exon number 3
gene id G15953
representative True

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 9555004 ~ 9669466 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

atacacgcacgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaaccacacacacacacacgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacagacagacagacagacagacacacacacacacacacacacacacacacacacagacacacacaaacacacacagacagacacacacacagacacacacacacacacacacacacacacacacacacacacacacacacacagacacacacacagacacacacacacacagacacacacacacacacacacacagacacacacacacacacacacagaaacacacacacacacagacacacacacacacacacagacacacacacagac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU21606 lncRNA downstream 8970 9545579 ~ 9546034 (-) False G15952
TU21616 lncRNA downstream 8970 9545579 ~ 9546034 (-) True G15952
TU21617 lncRNA downstream 8970 9545579 ~ 9546034 (-) False G15952
TU21587 lncRNA downstream 40013 9514341 ~ 9514991 (-) True G15942
TU21584 lncRNA downstream 40836 9507052 ~ 9514168 (-) True G15939
TU21566 lncRNA upstream 10955 9680421 ~ 9710132 (-) False LOC120551163
TU21637 lncRNA upstream 17946 9687412 ~ 9777378 (-) True G15966
TU21652 lncRNA upstream 83687 9753153 ~ 9969138 (-) True G15977
TU21662 lncRNA upstream 99439 9768905 ~ 9775375 (-) True G15982
TU21664 lncRNA upstream 99553 9769019 ~ 9805899 (-) False G15983
XM_039777124.1 mRNA downstream 11863 9531021 ~ 9543141 (-) True LOC120543835
XM_039788333.1 mRNA downstream 23909 9524207 ~ 9531095 (-) True LOC120551135
XM_039788319.1 mRNA downstream 32773 9513476 ~ 9522231 (-) True LOC120551129
XM_039777530.1 mRNA downstream 52110 9488322 ~ 9502894 (-) True LOC120544027
XM_039777568.1 mRNA downstream 121349 9348209 ~ 9433655 (-) True eif2a
XM_039788379.1 mRNA upstream 7369 9676835 ~ 9680842 (-) True LOC120551163
XM_039788414.1 mRNA upstream 178532 9847998 ~ 9851668 (-) True dharma
XM_039824593.1 mRNA upstream 484425 10153891 ~ 10178798 (-) False zgc:162698
XM_039824587.1 mRNA upstream 484425 10153891 ~ 10178795 (-) True zgc:162698
XM_039824601.1 mRNA upstream 515067 10184533 ~ 10201584 (-) False LOC120574297
TU21571 other downstream 37034 9513504 ~ 9517970 (-) False LOC120551129
TU21567 other downstream 121402 9430861 ~ 9433602 (-) False eif2a
TU21546 other downstream 316220 9237967 ~ 9238784 (-) True G15903
TU21489 other downstream 410884 9131539 ~ 9144120 (-) False LOC120543625
TU21433 other downstream 508571 8971914 ~ 9046433 (-) True G15820
TU21765 other upstream 467222 10136688 ~ 10138347 (-) True G16066
TU21762 other upstream 470710 10140176 ~ 10149571 (-) True G16064
TU21797 other upstream 656787 10326253 ~ 10330847 (-) False LOC120574316
TU21879 other upstream 752596 10422062 ~ 10424770 (-) True G16143
TU22339 other upstream 2279871 11949337 ~ 11955578 (-) True G16407

Expression Profile