RNA id: TU21658



Basic Information


Item Value
RNA id TU21658
length 220
lncRNA type inter_gene
GC content 0.51
exon number 2
gene id G15978
representative True

Chromosome Information


Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 9958549 ~ 9961609 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


cacacacacacacacacacagacacacagacacacagagacacacacacagacacacacacacacacacacacacacacacacacagacagacacacacacacacagacacagacacacacacacacagacacacacacacagacacacacacaggcacacacacacacacacacacacacccacacacacacacacacacacacacacacacacacaca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU21684 lncRNA downstream 4672 9940680 ~ 9953877 (-) False G15996
TU21654 lncRNA downstream 14022 9844989 ~ 9944527 (-) False G15977
TU21656 lncRNA downstream 14022 9866844 ~ 9944527 (-) False G15977
TU21653 lncRNA downstream 14022 9887622 ~ 9944527 (-) False G15977
TU21650 lncRNA downstream 62755 9866844 ~ 9895794 (-) False G15977
TU21698 lncRNA upstream 42887 10004496 ~ 10004722 (-) True G16004
TU21711 lncRNA upstream 131964 10093573 ~ 10093980 (-) True G16017
TU21717 lncRNA upstream 160998 10122607 ~ 10122813 (-) True G16023
TU21720 lncRNA upstream 165299 10126908 ~ 10127408 (-) True G16026
TU21721 lncRNA upstream 167477 10129086 ~ 10129763 (-) True G16027
XM_039788414.1 mRNA downstream 106881 9847998 ~ 9851668 (-) True dharma
XM_039788379.1 mRNA downstream 277707 9676835 ~ 9680842 (-) True LOC120551163
XM_039777124.1 mRNA downstream 415408 9531021 ~ 9543141 (-) True LOC120543835
XM_039788333.1 mRNA downstream 427454 9524207 ~ 9531095 (-) True LOC120551135
XM_039788319.1 mRNA downstream 436318 9513476 ~ 9522231 (-) True LOC120551129
XM_039824593.1 mRNA upstream 192282 10153891 ~ 10178798 (-) False zgc:162698
XM_039824587.1 mRNA upstream 192282 10153891 ~ 10178795 (-) True zgc:162698
XM_039824601.1 mRNA upstream 222924 10184533 ~ 10201584 (-) False LOC120574297
XM_039824600.1 mRNA upstream 222924 10184533 ~ 10201584 (-) True LOC120574297
XM_039788438.1 mRNA upstream 265619 10227228 ~ 10248071 (-) True LOC120551203
XR_005638376.1 other downstream 326521 9631923 ~ 9632028 (-) True LOC120554346
TU21571 other downstream 440579 9513504 ~ 9517970 (-) False LOC120551129
TU21567 other downstream 524947 9430861 ~ 9433602 (-) False eif2a
TU21546 other downstream 719765 9237967 ~ 9238784 (-) True G15903
TU21489 other downstream 814429 9131539 ~ 9144120 (-) False LOC120543625
TU21765 other upstream 175079 10136688 ~ 10138347 (-) True G16066
TU21762 other upstream 178567 10140176 ~ 10149571 (-) True G16064
TU21797 other upstream 364644 10326253 ~ 10330847 (-) False LOC120574316
TU21879 other upstream 460453 10422062 ~ 10424770 (-) True G16143
TU22339 other upstream 1987728 11949337 ~ 11955578 (-) True G16407

Expression Profile