RNA id: TU21684



Basic Information


Item Value
RNA id TU21684
length 260
lncRNA type inter_gene
GC content 0.36
exon number 3
gene id G15996
representative False

Chromosome Information


Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 9940680 ~ 9965528 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtgtatatgtgtgtgtgtgtgtgtgtgtatatatgtgtgtctgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtctgtgtgtgtgtgtctatgtgt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU21650 lncRNA downstream 44886 9866844 ~ 9895794 (-) False G15977
TU21664 lncRNA downstream 134781 9769019 ~ 9805899 (-) False G15983
TU21665 lncRNA downstream 134781 9769019 ~ 9805899 (-) False G15983
TU21666 lncRNA downstream 134781 9769019 ~ 9805899 (-) False G15983
TU21667 lncRNA downstream 134781 9769019 ~ 9805899 (-) False G15983
TU21658 lncRNA upstream 4672 9958549 ~ 9961609 (-) True G15978
TU21651 lncRNA upstream 7408 9961285 ~ 9969138 (-) False G15977
TU21698 lncRNA upstream 50619 10004496 ~ 10004722 (-) True G16004
TU21711 lncRNA upstream 139696 10093573 ~ 10093980 (-) True G16017
TU21717 lncRNA upstream 168730 10122607 ~ 10122813 (-) True G16023
XM_039788414.1 mRNA downstream 89012 9847998 ~ 9851668 (-) True dharma
XM_039788379.1 mRNA downstream 259838 9676835 ~ 9680842 (-) True LOC120551163
XM_039777124.1 mRNA downstream 397539 9531021 ~ 9543141 (-) True LOC120543835
XM_039788333.1 mRNA downstream 409585 9524207 ~ 9531095 (-) True LOC120551135
XM_039788319.1 mRNA downstream 418449 9513476 ~ 9522231 (-) True LOC120551129
XM_039824593.1 mRNA upstream 200014 10153891 ~ 10178798 (-) False zgc:162698
XM_039824587.1 mRNA upstream 200014 10153891 ~ 10178795 (-) True zgc:162698
XM_039824601.1 mRNA upstream 230656 10184533 ~ 10201584 (-) False LOC120574297
XM_039824600.1 mRNA upstream 230656 10184533 ~ 10201584 (-) True LOC120574297
XM_039788438.1 mRNA upstream 273351 10227228 ~ 10248071 (-) True LOC120551203
XR_005638376.1 other downstream 308652 9631923 ~ 9632028 (-) True LOC120554346
TU21571 other downstream 422710 9513504 ~ 9517970 (-) False LOC120551129
TU21567 other downstream 507078 9430861 ~ 9433602 (-) False eif2a
TU21546 other downstream 701896 9237967 ~ 9238784 (-) True G15903
TU21489 other downstream 796560 9131539 ~ 9144120 (-) False LOC120543625
TU21765 other upstream 182811 10136688 ~ 10138347 (-) True G16066
TU21762 other upstream 186299 10140176 ~ 10149571 (-) True G16064
TU21797 other upstream 372376 10326253 ~ 10330847 (-) False LOC120574316
TU21879 other upstream 468185 10422062 ~ 10424770 (-) True G16143
TU22339 other upstream 1995460 11949337 ~ 11955578 (-) True G16407

Expression Profile