RNA id: TU21698



Basic Information


Item Value
RNA id TU21698
length 227
lncRNA type inter_gene
GC content 0.52
exon number 1
gene id G16004
representative True

Chromosome Information


Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 10004496 ~ 10004722 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


ttccactaattaaccctgacaaagcacacctgtgaaggtaaaaccatttcaggtgactacctcatgaagctcattgagagaacaccaagggtttgcagagttatcaaaaaaaagcaaagggtggctactttgaagaatctaaaatataagacatgttttcagttatttcacacttttttgttaagtacataattccatatgtgttcattcatagttttgatgccttc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU21652 lncRNA downstream 35358 9753153 ~ 9969138 (-) True G15977
TU21657 lncRNA downstream 35358 9853048 ~ 9969138 (-) False G15977
TU21651 lncRNA downstream 35358 9961285 ~ 9969138 (-) False G15977
TU21685 lncRNA downstream 38968 9945324 ~ 9965528 (-) True G15996
TU21686 lncRNA downstream 39326 9945324 ~ 9965170 (-) False G15996
TU21711 lncRNA upstream 88851 10093573 ~ 10093980 (-) True G16017
TU21717 lncRNA upstream 117885 10122607 ~ 10122813 (-) True G16023
TU21720 lncRNA upstream 122186 10126908 ~ 10127408 (-) True G16026
TU21721 lncRNA upstream 124364 10129086 ~ 10129763 (-) True G16027
TU21722 lncRNA upstream 125626 10130348 ~ 10130939 (-) True G16028
XM_039788414.1 mRNA downstream 152828 9847998 ~ 9851668 (-) True dharma
XM_039788379.1 mRNA downstream 323654 9676835 ~ 9680842 (-) True LOC120551163
XM_039777124.1 mRNA downstream 461355 9531021 ~ 9543141 (-) True LOC120543835
XM_039788333.1 mRNA downstream 473401 9524207 ~ 9531095 (-) True LOC120551135
XM_039788319.1 mRNA downstream 482265 9513476 ~ 9522231 (-) True LOC120551129
XM_039824593.1 mRNA upstream 149169 10153891 ~ 10178798 (-) False zgc:162698
XM_039824587.1 mRNA upstream 149169 10153891 ~ 10178795 (-) True zgc:162698
XM_039824601.1 mRNA upstream 179811 10184533 ~ 10201584 (-) False LOC120574297
XM_039824600.1 mRNA upstream 179811 10184533 ~ 10201584 (-) True LOC120574297
XM_039788438.1 mRNA upstream 222506 10227228 ~ 10248071 (-) True LOC120551203
XR_005638376.1 other downstream 372468 9631923 ~ 9632028 (-) True LOC120554346
TU21571 other downstream 486526 9513504 ~ 9517970 (-) False LOC120551129
TU21567 other downstream 570894 9430861 ~ 9433602 (-) False eif2a
TU21546 other downstream 765712 9237967 ~ 9238784 (-) True G15903
TU21489 other downstream 860376 9131539 ~ 9144120 (-) False LOC120543625
TU21765 other upstream 131966 10136688 ~ 10138347 (-) True G16066
TU21762 other upstream 135454 10140176 ~ 10149571 (-) True G16064
TU21797 other upstream 321531 10326253 ~ 10330847 (-) False LOC120574316
TU21879 other upstream 417340 10422062 ~ 10424770 (-) True G16143
TU22339 other upstream 1944615 11949337 ~ 11955578 (-) True G16407

Expression Profile