Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU22775 |
| length | 823 |
| RNA type | TUCP |
| GC content | 0.56 |
| exon number | 5 |
| gene id | ccdc9 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_053113.1 |
| NCBI id | CM020910.1 |
| chromosome length | 48524041 |
| location | 13224914 ~ 13261849 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU22777 | lncRNA | downstream | 18180 | 13224934 ~ 13230423 (-) | False | ccdc9 |
| TU22774 | lncRNA | downstream | 83009 | 13164817 ~ 13165594 (-) | True | G16709 |
| TU22744 | lncRNA | downstream | 111535 | 13015625 ~ 13137068 (-) | False | G16688 |
| TU22746 | lncRNA | downstream | 111535 | 13015625 ~ 13137068 (-) | False | G16688 |
| TU22739 | lncRNA | downstream | 111535 | 13073619 ~ 13137068 (-) | True | G16688 |
| TU22835 | lncRNA | upstream | 56239 | 13318063 ~ 13360219 (-) | True | G16737 |
| TU22851 | lncRNA | upstream | 134386 | 13396210 ~ 13398320 (-) | True | G16751 |
| TU22849 | lncRNA | upstream | 134793 | 13396617 ~ 13398182 (-) | False | G16751 |
| TU23001 | lncRNA | upstream | 443657 | 13705481 ~ 13708040 (-) | False | G16871 |
| TU23024 | lncRNA | upstream | 494125 | 13755949 ~ 13822497 (-) | False | G16880 |
| XM_039788578.1 | mRNA | downstream | 38077 | 13170383 ~ 13210526 (-) | True | pak4 |
| XM_039823256.1 | mRNA | downstream | 86645 | 13145662 ~ 13161958 (-) | False | zgc:152863 |
| XM_039823248.1 | mRNA | downstream | 86645 | 13145662 ~ 13161958 (-) | True | zgc:152863 |
| XM_039823210.1 | mRNA | downstream | 217958 | 13024216 ~ 13030645 (-) | False | eif3k |
| XM_039823202.1 | mRNA | downstream | 217958 | 13024216 ~ 13030645 (-) | True | eif3k |
| XM_039791709.1 | mRNA | upstream | 51619 | 13313443 ~ 13335153 (-) | True | sae1 |
| XM_039790089.1 | mRNA | upstream | 157127 | 13418951 ~ 13446001 (-) | True | klc3 |
| XM_039790118.1 | mRNA | upstream | 203188 | 13465012 ~ 13530107 (-) | False | mark4b |
| XM_039790099.1 | mRNA | upstream | 203188 | 13465012 ~ 13530106 (-) | True | mark4b |
| XM_039790108.1 | mRNA | upstream | 206199 | 13468023 ~ 13530107 (-) | False | mark4b |
| unassigned_transcript_91 | other | downstream | 244314 | 13004217 ~ 13004289 (-) | True | trnak-uuu_5 |
| unassigned_transcript_89 | other | downstream | 249564 | 12998967 ~ 12999039 (-) | True | trnak-uuu_3 |
| XR_005637072.1 | other | downstream | 586413 | 12654605 ~ 12662190 (-) | False | srsf7a |
| XR_005638514.1 | other | downstream | 682558 | 12565855 ~ 12566045 (-) | True | LOC120554567 |
| XR_005638465.1 | other | downstream | 683711 | 12564729 ~ 12564892 (-) | True | LOC120554484 |
| TU22833 | other | upstream | 61044 | 13322868 ~ 13335139 (-) | False | sae1 |
| TU22995 | other | upstream | 401083 | 13662907 ~ 13754616 (-) | False | si:ch211-14c7.2 |
| TU23000 | other | upstream | 439819 | 13701643 ~ 13708040 (-) | True | G16871 |
| TU23022 | other | upstream | 554272 | 13816096 ~ 13823057 (-) | False | G16880 |
| TU23133 | other | upstream | 820139 | 14081963 ~ 14086764 (-) | False | gpr4 |
