RNA id: TU23069


Basic Information

Item Value
RNA id TU23069
length 519
lncRNA type inter_gene
GC content 0.38
exon number 2
gene id G16889
representative True

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 13905904 ~ 13908030 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TCAGAGTTCGGTGGGAGTTTAGAGCATTGAAAGAGTGCGTTGGTTCTTCTTTTGATTATGACGAGAGTGCCCAGGCATCAGTGGTAATTCGACACAGCGCCATCTATGGGAATGGCGAGCTAAACTCATTTCAGGACAATAGTGTACACGCCATTACAAaacggaaaaaaacaaaaactataaaccgattttgaatcggtagagcttgaatcacGATATGAATGTGATtcgatttttttaatttttttttgcacacccctagtgGAGCGAATGTGGATGACCAGTCATACTGCACATCTAATCCTGACTTTAATTGCCAGTTACAAAAGAATGTGCAGGGATTTCATGTTCCTAAATTGAACAGtccaacattttaatttaataatcacacattaaattagttttttggtGGATTCTCTCTTTATGTGCAGCATGTACTCATCAGTACAGAAGCACAGACAAACCAAAGGTAATTTTATGCCCAAATTTATGTTTTCTGGATGTAAATGTTTAAtgggg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU23068 lncRNA downstream 116 13905204 ~ 13905788 (-) True G16888
TU23067 lncRNA downstream 116 13905257 ~ 13905788 (-) False G16888
TU23016 lncRNA downstream 82847 13816096 ~ 13823057 (-) False G16880
TU23018 lncRNA downstream 82847 13816096 ~ 13823057 (-) False G16880
TU23020 lncRNA downstream 82847 13816096 ~ 13823057 (-) False G16880
TU23088 lncRNA upstream 20313 13928343 ~ 13928714 (-) True G16898
TU23080 lncRNA upstream 43031 13951061 ~ 14016471 (-) False G16894
TU23081 lncRNA upstream 43031 13951061 ~ 13981614 (-) True G16894
TU23134 lncRNA upstream 230696 14138726 ~ 14140433 (-) True G16933
TU23145 lncRNA upstream 305818 14213848 ~ 14215714 (-) True G16942
XM_039791720.1 mRNA downstream 6000 13895034 ~ 13899904 (-) True foxa3
XM_039780014.1 mRNA downstream 67098 13825916 ~ 13838806 (-) False pld3
XM_039780023.1 mRNA downstream 67098 13825916 ~ 13838806 (-) True pld3
XM_039823190.1 mRNA downstream 94135 13765544 ~ 13811769 (-) True prx
XM_039783404.1 mRNA downstream 143536 13741519 ~ 13762368 (-) True si:ch211-14c7.2
XM_039783199.1 mRNA upstream 99 13908129 ~ 13912626 (-) True irf2bp1
XM_039822643.1 mRNA upstream 51740 13959770 ~ 14044832 (-) False nova2
XM_039822634.1 mRNA upstream 51740 13959770 ~ 14044831 (-) True nova2
XM_039787130.1 mRNA upstream 170547 14078577 ~ 14086757 (-) True gpr4
XM_039783520.1 mRNA upstream 258083 14166113 ~ 14203307 (-) True eml2
TU23022 other downstream 82847 13816096 ~ 13823057 (-) False G16880
TU22995 other downstream 151288 13662907 ~ 13754616 (-) False si:ch211-14c7.2
TU23000 other downstream 197864 13701643 ~ 13708040 (-) True G16871
TU22833 other downstream 570765 13322868 ~ 13335139 (-) False sae1
TU22775 other downstream 644080 13248603 ~ 13261824 (-) False ccdc9
TU23133 other upstream 173933 14081963 ~ 14086764 (-) False gpr4
XR_005641363.1 other upstream 1410810 15318840 ~ 15325798 (-) True si:ch1073-145m9.1
TU23599 other upstream 1787524 15695554 ~ 15706455 (-) False G17287
TU23600 other upstream 1787524 15695554 ~ 15714263 (-) False G17287
TU23589 other upstream 1794579 15702609 ~ 15714263 (-) True G17287

Expression Profile