RNA id: TU23134



Basic Information


Item Value
RNA id TU23134
length 221
lncRNA type inter_gene
GC content 0.50
exon number 2
gene id G16933
representative True

Chromosome Information


Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 14138726 ~ 14140433 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GCCGCCGCTCTGCTCACACTGTACTGCGCTGCGGAGGCTGTTTAAAAGACCACCGCTACTATTGctgagcgttttttttttcgcGGAGGTTGAATGAAGAATGACTTTTCCTCGGGATGGATACGCGCTGTTTTTGGGGGGTGACAGCGGCGACTTTAGGAGCTGAACGGACCAGAAAATGATTCTTTCAGATGAGATGTGGAGCCTATTATGTGTTGAAC

Function


GO: NA

KEGG:

id description
ko04978 Mineral absorption
ko04964 Proximal tubule bicarbonate reclamation

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU23080 lncRNA downstream 122255 13951061 ~ 14016471 (-) False G16894
TU23081 lncRNA downstream 157112 13951061 ~ 13981614 (-) True G16894
TU23088 lncRNA downstream 210012 13928343 ~ 13928714 (-) True G16898
TU23069 lncRNA downstream 230696 13905904 ~ 13908030 (-) True G16889
TU23068 lncRNA downstream 232938 13905204 ~ 13905788 (-) True G16888
TU23145 lncRNA upstream 73415 14213848 ~ 14215714 (-) True G16942
TU23170 lncRNA upstream 107495 14247928 ~ 14249738 (-) False caln1
TU23171 lncRNA upstream 107495 14247928 ~ 14249668 (-) False caln1
TU23172 lncRNA upstream 107589 14248022 ~ 14249668 (-) False caln1
XR_005637815.1 lncRNA upstream 380333 14520766 ~ 14523356 (-) True LOC120551036
XM_039787130.1 mRNA downstream 51969 14078577 ~ 14086757 (-) True gpr4
XM_039822643.1 mRNA downstream 93894 13959770 ~ 14044832 (-) False nova2
XM_039822634.1 mRNA downstream 93895 13959770 ~ 14044831 (-) True nova2
XM_039783199.1 mRNA downstream 226100 13908129 ~ 13912626 (-) True irf2bp1
XM_039791720.1 mRNA downstream 238822 13895034 ~ 13899904 (-) True foxa3
XM_039783520.1 mRNA upstream 25680 14166113 ~ 14203307 (-) True eml2
XM_039783530.1 mRNA upstream 25680 14166113 ~ 14203306 (-) False eml2
XM_039783545.1 mRNA upstream 25680 14166113 ~ 14203305 (-) False eml2
XM_039783537.1 mRNA upstream 25680 14166113 ~ 14203305 (-) False eml2
XM_039783555.1 mRNA upstream 25680 14166113 ~ 14196076 (-) False eml2
TU23133 other downstream 51962 14081963 ~ 14086764 (-) False gpr4
TU23022 other downstream 315669 13816096 ~ 13823057 (-) False G16880
TU22995 other downstream 384110 13662907 ~ 13754616 (-) False si:ch211-14c7.2
TU23000 other downstream 430686 13701643 ~ 13708040 (-) True G16871
TU22833 other downstream 803587 13322868 ~ 13335139 (-) False sae1
XR_005641363.1 other upstream 1178407 15318840 ~ 15325798 (-) True si:ch1073-145m9.1
TU23599 other upstream 1555121 15695554 ~ 15706455 (-) False G17287
TU23600 other upstream 1555121 15695554 ~ 15714263 (-) False G17287
TU23589 other upstream 1562176 15702609 ~ 15714263 (-) True G17287
XR_005637173.1 other upstream 1905575 16046008 ~ 16060408 (-) False sdhdb

Expression Profile