RNA id: TU23849



Basic Information


Item Value
RNA id TU23849
length 214
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G17466
representative True

Chromosome Information


Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 16400623 ~ 16400836 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CGCTAAAACCTTTATGTACCCTTTACAAACAAGCTGTGAAAGttcttgacaaaaaaaacaagaaactaCCATCACTGCACgattataaaaaaacacaacctatTAACCTTTGAcagttttctctgttttgcagATATGTGCCTGATGTATAAATTGACCCATGATCTTGCACCACCCCCACTCAAGCAATGTGTGTCATTTTGCAGAGATGAGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU23748 lncRNA downstream 352607 16016922 ~ 16048016 (-) True G17389
TU23597 lncRNA downstream 681582 15710784 ~ 15719041 (-) False G17287
XR_005637445.1 lncRNA downstream 686534 15713132 ~ 15714089 (-) True LOC120549843
TU23562 lncRNA downstream 749623 15646740 ~ 15651000 (-) False lyrm9
TU23563 lncRNA downstream 749623 15646740 ~ 15651000 (-) False lyrm9
TU23886 lncRNA upstream 16459 16417295 ~ 16418742 (-) True G17499
TU24024 lncRNA upstream 295977 16696813 ~ 16698009 (-) True G17571
TU24054 lncRNA upstream 309933 16710769 ~ 16766469 (-) True G17579
TU24067 lncRNA upstream 319382 16720218 ~ 16935713 (-) True G17583
TU24076 lncRNA upstream 320738 16721574 ~ 16736425 (-) False G17587
XM_039784419.1 mRNA downstream 14555 16381343 ~ 16386068 (-) True atf5b
XM_039792526.1 mRNA downstream 63998 16319497 ~ 16336625 (-) True LOC120553834
XM_039782690.1 mRNA downstream 191647 16190131 ~ 16208976 (-) True LOC120547208
XM_039792939.1 mRNA downstream 327720 16064444 ~ 16072903 (-) False il4i1
XM_039792930.1 mRNA downstream 327736 16064444 ~ 16072887 (-) False il4i1
XM_039791847.1 mRNA upstream 40261 16441097 ~ 16560068 (-) False phldb1b
XM_039791880.1 mRNA upstream 40261 16441097 ~ 16549250 (-) True phldb1b
XM_039791889.1 mRNA upstream 40261 16441097 ~ 16543623 (-) False phldb1b
XM_039791911.1 mRNA upstream 40261 16441097 ~ 16527730 (-) False phldb1b
XM_039791939.1 mRNA upstream 40261 16441097 ~ 16527729 (-) False phldb1b
XR_005637173.1 other downstream 340215 16046008 ~ 16060408 (-) False sdhdb
XR_005637172.1 other downstream 340215 16049872 ~ 16060408 (-) False sdhdb
TU23600 other downstream 686360 15695554 ~ 15714263 (-) False G17287
TU23589 other downstream 686360 15702609 ~ 15714263 (-) True G17287
TU23599 other downstream 694168 15695554 ~ 15706455 (-) False G17287
TU24093 other upstream 447325 16848161 ~ 16930994 (-) True G17597
TU24264 other upstream 1072900 17473736 ~ 17478844 (-) False xaf1
TU24398 other upstream 1731251 18132087 ~ 18151968 (-) False zgc:165508
TU24394 other upstream 1804746 18205582 ~ 18222854 (-) False LOC120545639
XR_005637451.1 other upstream 3401877 19802713 ~ 19810130 (-) False si:ch211-11n16.2

Expression Profile