RNA id: TU24265



Basic Information


Item Value
RNA id TU24265
length 268
lncRNA type inter_gene
GC content 0.54
exon number 1
gene id G17716
representative True

Chromosome Information


Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 17472679 ~ 17472946 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


TAACAACATTCACTCTTTGTGTTGGTGAAAGTTTAGAACAGCAATATTTATAATCAAGAGGAACAGCAAGAGGCCATGAAAATCACGCCATGTTATGATAATCTGATGAATATTAATGACACATATTGTATCAAAACTGAGCAGCATGGTACAGTACACTAAATATAAAGCCACAATCATTTCAAAGGCACTTGCTGAAaccatgttttttatttttattaatttaatttactaatTATATTCTTTCTTTACACACTTAAACATGACA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU24263 lncRNA downstream 5188 17465020 ~ 17467491 (-) True G17714
TU24245 lncRNA downstream 13291 17456595 ~ 17459388 (-) True G17701
TU24260 lncRNA downstream 16220 17453929 ~ 17456459 (-) True G17713
TU24256 lncRNA downstream 18752 17444392 ~ 17453927 (-) True G17710
TU24236 lncRNA downstream 29309 17418909 ~ 17443370 (-) False G17696
TU24290 lncRNA upstream 220050 17692996 ~ 17693268 (-) True G17739
TU24297 lncRNA upstream 283222 17756168 ~ 17756432 (-) True G17745
TU24342 lncRNA upstream 328540 17801486 ~ 17801933 (-) False LOC120552194
TU24345 lncRNA upstream 371488 17844434 ~ 17849019 (-) True G17782
TU24397 lncRNA upstream 654520 18127466 ~ 18132016 (-) False zgc:165508
XM_039818775.1 mRNA downstream 242314 17227524 ~ 17230365 (-) True tmem199
XM_039822492.1 mRNA downstream 309975 17155692 ~ 17162704 (-) True gemin4
XM_039788677.1 mRNA downstream 522843 16947756 ~ 16949836 (-) True LOC120551331
XM_039784176.1 mRNA downstream 807997 16655490 ~ 16664682 (-) True usf1
XM_039784169.1 mRNA downstream 817339 16644120 ~ 16655340 (-) True LOC120548132
XM_039777970.1 mRNA upstream 1 17472947 ~ 17478903 (-) True xaf1
XM_039777899.1 mRNA upstream 31853 17504799 ~ 17634049 (-) True LOC120544259
XM_039782585.1 mRNA upstream 192872 17665818 ~ 17743624 (-) True zgc:153039
XM_039790011.1 mRNA upstream 327053 17799999 ~ 17890661 (-) True LOC120552194
XM_039790020.1 mRNA upstream 331178 17804124 ~ 17890661 (-) False LOC120552194
TU24093 other downstream 541685 16848161 ~ 16930994 (-) True G17597
XR_005637173.1 other downstream 1412271 16046008 ~ 16060408 (-) False sdhdb
XR_005637172.1 other downstream 1412271 16049872 ~ 16060408 (-) False sdhdb
TU23600 other downstream 1758416 15695554 ~ 15714263 (-) False G17287
TU24264 other upstream 790 17473736 ~ 17478844 (-) False xaf1
TU24398 other upstream 659141 18132087 ~ 18151968 (-) False zgc:165508
TU24394 other upstream 732636 18205582 ~ 18222854 (-) False LOC120545639
XR_005637451.1 other upstream 2329767 19802713 ~ 19810130 (-) False si:ch211-11n16.2
TU25100 other upstream 2664396 20137342 ~ 20141512 (-) False LOC120547993

Expression Profile