RNA id: TU24297



Basic Information


Item Value
RNA id TU24297
length 265
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G17745
representative True

Chromosome Information


Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 17756168 ~ 17756432 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


tacgttttatatttttaaccgTAGGAATTATAAATTGTGTTTTACTGATTTTGTAATTTCCCTTATCAAAACATTCCATTATCATTTTCTTCAGAGCGAAAGAGCGCCCCTCTGTCACTGCGTGCGTGGTGCAGTCCTGTCTGTGCTCTGTCTAGTGGCCAGTAAAATGCTACGAACGCTCAAAGGAGGCCAGCTTTTCCTGGCCTCCTTTAGAGAAAAGAATTTAtattttcagccaatcagattgaaGCTAGGTTTGACCGAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU24290 lncRNA downstream 62900 17692996 ~ 17693268 (-) True G17739
TU24265 lncRNA downstream 283222 17472679 ~ 17472946 (-) True G17716
TU24263 lncRNA downstream 288677 17465020 ~ 17467491 (-) True G17714
TU24245 lncRNA downstream 296780 17456595 ~ 17459388 (-) True G17701
TU24260 lncRNA downstream 299709 17453929 ~ 17456459 (-) True G17713
TU24342 lncRNA upstream 45054 17801486 ~ 17801933 (-) False LOC120552194
TU24345 lncRNA upstream 88002 17844434 ~ 17849019 (-) True G17782
TU24397 lncRNA upstream 371034 18127466 ~ 18132016 (-) False zgc:165508
TU24506 lncRNA upstream 626727 18383159 ~ 18383539 (-) True G17917
TU24537 lncRNA upstream 836543 18592975 ~ 18593673 (-) True G17936
XM_039782585.1 mRNA downstream 12544 17665818 ~ 17743624 (-) True zgc:153039
XM_039777899.1 mRNA downstream 122119 17504799 ~ 17634049 (-) True LOC120544259
XM_039777970.1 mRNA downstream 277265 17472947 ~ 17478903 (-) True xaf1
XM_039818775.1 mRNA downstream 525803 17227524 ~ 17230365 (-) True tmem199
XM_039822492.1 mRNA downstream 593464 17155692 ~ 17162704 (-) True gemin4
XM_039790011.1 mRNA upstream 43567 17799999 ~ 17890661 (-) True LOC120552194
XM_039790020.1 mRNA upstream 47692 17804124 ~ 17890661 (-) False LOC120552194
XM_039790001.1 mRNA upstream 47692 17804124 ~ 17890661 (-) False LOC120552194
XM_039790030.1 mRNA upstream 47692 17804124 ~ 17863980 (-) False LOC120552194
XM_039822496.1 mRNA upstream 362865 18119297 ~ 18124891 (-) True LOC120573061
TU24264 other downstream 277324 17473736 ~ 17478844 (-) False xaf1
TU24093 other downstream 825174 16848161 ~ 16930994 (-) True G17597
XR_005637173.1 other downstream 1695760 16046008 ~ 16060408 (-) False sdhdb
XR_005637172.1 other downstream 1695760 16049872 ~ 16060408 (-) False sdhdb
TU23589 other downstream 2041905 15702609 ~ 15714263 (-) True G17287
TU24398 other upstream 375655 18132087 ~ 18151968 (-) False zgc:165508
TU24394 other upstream 449150 18205582 ~ 18222854 (-) False LOC120545639
XR_005637451.1 other upstream 2046281 19802713 ~ 19810130 (-) False si:ch211-11n16.2
TU25100 other upstream 2380910 20137342 ~ 20141512 (-) False LOC120547993
TU25187 other upstream 3337750 21094182 ~ 21097201 (-) True si:ch1073-340i21.1

Expression Profile