RNA id: TU25750


Basic Information

Item Value
RNA id TU25750
length 400
lncRNA type inter_gene
GC content 0.52
exon number 2
gene id G18837
representative True

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 22777736 ~ 22779777 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

aaacaaaaaacgatggttatttgattttcgttttaaaatacaacatttgaaattgaaatacaaggcatgttttccttttcatggtcaacaggggatgggagaaatttaaaatatgctttgattttcattttctattttatataacaaaaataaaatcactcgaaaacagaaacgaaaaaaagtcttgttttttcatattcagagaccggatgttgtcatttccaaggcaacagcgccagcctagcctaccagtgttgctttcagcccaggctaaaattactttggaaacctatactcttgataatgcttggggggaattttatttcataatgtcacatgtatttattcccctctctccctgcctccctctgactctctgtgaaaatcgaatgaacgaaaa

Function

GO: NA

KEGG:

id description
ko00983 Drug metabolism - other enzymes

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_005637251.1 lncRNA downstream 141326 22635577 ~ 22636410 (-) True LOC120548681
TU25713 lncRNA downstream 344774 22432553 ~ 22432962 (-) True G18810
TU25706 lncRNA downstream 413241 22364271 ~ 22364495 (-) True G18803
TU25698 lncRNA downstream 491527 22283003 ~ 22286209 (-) True G18795
TU25667 lncRNA downstream 589049 22188263 ~ 22188687 (-) True G18770
XR_005641431.1 lncRNA upstream 14649 22794426 ~ 22795639 (-) True LOC120572359
TU25755 lncRNA upstream 36004 22815781 ~ 22815980 (-) True G18841
TU25794 lncRNA upstream 264972 23044749 ~ 23120934 (-) True G18868
TU25810 lncRNA upstream 357873 23137650 ~ 23138259 (-) True G18883
TU25824 lncRNA upstream 376164 23155941 ~ 23156504 (-) True G18896
XM_039821718.1 mRNA downstream 425154 22347311 ~ 22352582 (-) True smtla
XM_039790240.1 mRNA downstream 543962 22200393 ~ 22233774 (-) False fli1
XM_039788880.1 mRNA upstream 9267 22789044 ~ 22799012 (-) True LOC120551448
XM_039821365.1 mRNA upstream 81174 22860951 ~ 22871590 (-) True barx2
XM_039790989.1 mRNA upstream 95288 22875065 ~ 22882453 (-) True rbm7
XM_039780872.1 mRNA upstream 379519 23159296 ~ 23162078 (-) True LOC120546095
XM_039780884.1 mRNA upstream 382425 23162202 ~ 23169207 (-) True lbhl
TU25608 other downstream 770565 22001904 ~ 22007171 (-) False LOC120551419
TU25499 other downstream 1106257 21664095 ~ 21671479 (-) False gdpd5b
TU25281 other downstream 1515813 21246839 ~ 21261923 (-) False slc6a4a
TU25187 other downstream 1680535 21094182 ~ 21097201 (-) True si:ch1073-340i21.1
TU25100 other downstream 2636224 20137342 ~ 20141512 (-) False LOC120547993
TU25812 other upstream 359436 23139213 ~ 23148515 (-) True G18885
TU25813 other upstream 359623 23139400 ~ 23148515 (-) False G18885
TU25890 other upstream 466826 23246603 ~ 23252420 (-) True G18948
XR_005641870.1 other upstream 949711 23729488 ~ 23758826 (-) False atm
TU26143 other upstream 1044044 23823821 ~ 23827954 (-) True G19140

Expression Profile