RNA id: TU25755



Basic Information


Item Value
RNA id TU25755
length 200
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G18841
representative True

Chromosome Information


Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 22815781 ~ 22815980 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gacgaacgcgtcacatgggtttgttttctccggaaattcaaagccagactgtcatggcggctgttcagaatacgatctcatattgtactaaaatagttcactgaaacatgtttctgaaaacattttaagcgagaaataggccatgcagttgctgaatttgtcttcatttcagctcaacaaaggtcagtttaaaagatttt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_005641431.1 lncRNA downstream 20142 22794426 ~ 22795639 (-) True LOC120572359
TU25750 lncRNA downstream 36004 22777736 ~ 22779777 (-) True G18837
XR_005637251.1 lncRNA downstream 179371 22635577 ~ 22636410 (-) True LOC120548681
TU25713 lncRNA downstream 382819 22432553 ~ 22432962 (-) True G18810
TU25706 lncRNA downstream 451286 22364271 ~ 22364495 (-) True G18803
TU25794 lncRNA upstream 228769 23044749 ~ 23120934 (-) True G18868
TU25810 lncRNA upstream 321670 23137650 ~ 23138259 (-) True G18883
TU25824 lncRNA upstream 339961 23155941 ~ 23156504 (-) True G18896
TU25836 lncRNA upstream 359484 23175464 ~ 23175714 (-) True G18905
TU25842 lncRNA upstream 362656 23178636 ~ 23180583 (-) True G18911
XM_039788880.1 mRNA downstream 16769 22789044 ~ 22799012 (-) True LOC120551448
XM_039821718.1 mRNA downstream 463199 22347311 ~ 22352582 (-) True smtla
XM_039790240.1 mRNA downstream 582007 22200393 ~ 22233774 (-) False fli1
XM_039821365.1 mRNA upstream 44971 22860951 ~ 22871590 (-) True barx2
XM_039790989.1 mRNA upstream 59085 22875065 ~ 22882453 (-) True rbm7
XM_039780872.1 mRNA upstream 343316 23159296 ~ 23162078 (-) True LOC120546095
XM_039780884.1 mRNA upstream 346222 23162202 ~ 23169207 (-) True lbhl
XM_039782027.1 mRNA upstream 462622 23278602 ~ 23283802 (-) True cfap45
TU25608 other downstream 808610 22001904 ~ 22007171 (-) False LOC120551419
TU25499 other downstream 1144302 21664095 ~ 21671479 (-) False gdpd5b
TU25281 other downstream 1553858 21246839 ~ 21261923 (-) False slc6a4a
TU25187 other downstream 1718580 21094182 ~ 21097201 (-) True si:ch1073-340i21.1
TU25100 other downstream 2674269 20137342 ~ 20141512 (-) False LOC120547993
TU25812 other upstream 323233 23139213 ~ 23148515 (-) True G18885
TU25813 other upstream 323420 23139400 ~ 23148515 (-) False G18885
TU25890 other upstream 430623 23246603 ~ 23252420 (-) True G18948
XR_005641870.1 other upstream 913508 23729488 ~ 23758826 (-) False atm
TU26143 other upstream 1007841 23823821 ~ 23827954 (-) True G19140

Expression Profile