Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_005636718.1 |
| length | 555 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 4 |
| gene id | LOC120545612 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_053113.1 |
| NCBI id | CM020910.1 |
| chromosome length | 48524041 |
| location | 43668431 ~ 43669661 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU31993 | lncRNA | downstream | 70213 | 43597991 ~ 43598222 (-) | True | G23690 |
| TU31942 | lncRNA | downstream | 164637 | 43445657 ~ 43503798 (-) | False | G23648 |
| TU31940 | lncRNA | downstream | 208514 | 43445657 ~ 43459921 (-) | True | G23648 |
| TU31941 | lncRNA | downstream | 222002 | 43430630 ~ 43446433 (-) | False | G23648 |
| TU31875 | lncRNA | downstream | 295489 | 43372676 ~ 43372946 (-) | True | G23594 |
| TU32015 | lncRNA | upstream | 287 | 43669946 ~ 43670275 (-) | True | G23706 |
| TU32044 | lncRNA | upstream | 40893 | 43710552 ~ 43711108 (-) | True | G23728 |
| TU32046 | lncRNA | upstream | 43683 | 43713342 ~ 43713577 (-) | True | G23730 |
| TU32081 | lncRNA | upstream | 100959 | 43770618 ~ 43789410 (-) | False | smco4 |
| TU32075 | lncRNA | upstream | 101065 | 43770724 ~ 43789410 (-) | False | smco4 |
| XM_039819073.1 | mRNA | downstream | 90024 | 43566580 ~ 43578411 (-) | True | LOC120570616 |
| XM_039792056.1 | mRNA | downstream | 285222 | 43381126 ~ 43383213 (-) | True | LOC120553532 |
| XM_039824045.1 | mRNA | downstream | 321762 | 43242554 ~ 43346673 (-) | False | LOC120574039 |
| XM_039826347.1 | mRNA | downstream | 605190 | 42992791 ~ 43063245 (-) | True | efhd1 |
| XM_039786068.1 | mRNA | downstream | 757698 | 42904813 ~ 42910737 (-) | True | LOC120549271 |
| XM_039791810.1 | mRNA | upstream | 44623 | 43714282 ~ 43716741 (-) | False | LOC120553425 |
| XM_039791633.1 | mRNA | upstream | 100407 | 43770066 ~ 43789435 (-) | False | smco4 |
| XM_039791613.1 | mRNA | upstream | 100407 | 43770066 ~ 43789435 (-) | True | smco4 |
| XM_039791622.1 | mRNA | upstream | 100407 | 43770066 ~ 43789431 (-) | False | smco4 |
| XM_039824982.1 | mRNA | upstream | 413426 | 44083085 ~ 44087251 (-) | True | omgb |
| unassigned_transcript_121 | other | downstream | 129322 | 43539042 ~ 43539113 (-) | True | trnag-ucc_6 |
| unassigned_transcript_120 | other | downstream | 130263 | 43538091 ~ 43538172 (-) | True | trnas-aga_5 |
| unassigned_transcript_119 | other | downstream | 130853 | 43537511 ~ 43537582 (-) | True | trnaa-ugc_4 |
| unassigned_transcript_118 | other | downstream | 131740 | 43536624 ~ 43536695 (-) | True | trnag-ucc_5 |
| unassigned_transcript_117 | other | downstream | 132677 | 43535677 ~ 43535758 (-) | True | trnas-aga_4 |
| TU32041 | other | upstream | 31312 | 43700971 ~ 43701297 (-) | False | LOC120553425 |
| XR_005638163.1 | other | upstream | 31573 | 43701232 ~ 43716741 (-) | True | LOC120553425 |
| XR_005637812.1 | other | upstream | 1147256 | 44816915 ~ 44824993 (-) | False | mrps23 |
| unassigned_transcript_122 | other | upstream | 1241168 | 44910827 ~ 44910898 (-) | True | trnah-gug |
| unassigned_transcript_123 | other | upstream | 1242197 | 44911856 ~ 44911928 (-) | True | trnar-acg_1 |
