RNA id: TU32361



Basic Information


Item Value
RNA id TU32361
length 267
lncRNA type inter_gene
GC content 0.52
exon number 1
gene id G23990
representative True

Chromosome Information


Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 45330732 ~ 45330998 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


agtccttttcttgaatccaggctgattaagcccgctgcagatgaaggaatacttcggCCAGTAttccctcggatcccctttgtatatcaggccgatataaagtttgtaccagctcgaaactcgaccagcgaggtgatgctagtttgctagctagctagtccggactagagtgCTTCCTGTAGCGACGTGAGTCACGGTGGAAAAGCGAAGAAACACACagtgccgacagcttttatcctccctccgcctcctagtggcggggtggtg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU32357 lncRNA downstream 11850 45318607 ~ 45318882 (-) True G23986
TU32347 lncRNA downstream 325231 45003434 ~ 45005501 (-) True G23977
TU32333 lncRNA downstream 331515 44998977 ~ 44999217 (-) True G23964
TU32317 lncRNA downstream 364762 44965739 ~ 44965970 (-) True G23949
XR_005637324.1 lncRNA downstream 446394 44880670 ~ 44884338 (-) True LOC120549064
TU32367 lncRNA upstream 7508 45338506 ~ 45338872 (-) True G23996
TU32409 lncRNA upstream 137164 45468162 ~ 45468385 (-) True G24036
TU32410 lncRNA upstream 138861 45469859 ~ 45470303 (-) True G24037
XR_005637962.1 lncRNA upstream 443214 45774212 ~ 45775139 (-) False LOC120552149
TU32528 lncRNA upstream 443214 45774212 ~ 45775197 (-) True LOC120552149
XM_039778005.1 mRNA downstream 14865 44987963 ~ 45315867 (-) False sez6b
XM_039777999.1 mRNA downstream 14865 45007153 ~ 45315867 (-) False sez6b
XM_039777990.1 mRNA downstream 14865 45007153 ~ 45315867 (-) True sez6b
XM_039777980.1 mRNA downstream 344106 44968198 ~ 44986626 (-) True phf12b
XM_039788116.1 mRNA downstream 505745 44816628 ~ 44824987 (-) True mrps23
XM_039791360.1 mRNA upstream 164539 45495537 ~ 45628896 (-) False myo18ab
XM_039791353.1 mRNA upstream 164539 45495537 ~ 45628896 (-) False myo18ab
XM_039791346.1 mRNA upstream 164539 45495537 ~ 45628896 (-) False myo18ab
XM_039791377.1 mRNA upstream 165970 45496968 ~ 45664024 (-) False myo18ab
XM_039791337.1 mRNA upstream 165970 45496968 ~ 45664024 (-) False myo18ab
unassigned_transcript_136 other downstream 404276 44926385 ~ 44926456 (-) True trnah-gug_5
unassigned_transcript_135 other downstream 404573 44926087 ~ 44926159 (-) True trnah-aug
unassigned_transcript_134 other downstream 405174 44925487 ~ 44925558 (-) True trnah-gug_4
unassigned_transcript_133 other downstream 405472 44925188 ~ 44925260 (-) True trnar-acg_8
unassigned_transcript_132 other downstream 408119 44922541 ~ 44922613 (-) True trnar-acg_7
TU32961 other upstream 1803859 47134857 ~ 47142549 (-) False bet1l

Expression Profile