RNA id: TU32367


Basic Information

Item Value
RNA id TU32367
length 367
lncRNA type inter_gene
GC content 0.50
exon number 1
gene id G23996
representative True

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 45338506 ~ 45338872 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

cgacgtgagaggacgctggcgctggttattcgccgcttctccgtctgctattcgtctgctattctcttgtgtttgtgttcgctgtaccccctacctctggacagcctctgtacctctggacagtctctctgctggttcccgaagccgcctggggctccttgaccggactcttgcctcgtcggttagccgctagctagctgcccccgttcaccaaacgcgtggcggcaaatcctagctgcttcggcggctaacccgattgctgacctcctcctcataggcaacctccaccagatgcgagccgcgaccaagactagacattcctctccttcggtcatgctgtggatcattttggcaatcacctcattca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU32361 lncRNA downstream 7508 45330732 ~ 45330998 (-) True G23990
TU32357 lncRNA downstream 19624 45318607 ~ 45318882 (-) True G23986
TU32347 lncRNA downstream 333005 45003434 ~ 45005501 (-) True G23977
TU32333 lncRNA downstream 339289 44998977 ~ 44999217 (-) True G23964
TU32317 lncRNA downstream 372536 44965739 ~ 44965970 (-) True G23949
TU32409 lncRNA upstream 129290 45468162 ~ 45468385 (-) True G24036
TU32410 lncRNA upstream 130987 45469859 ~ 45470303 (-) True G24037
XR_005637962.1 lncRNA upstream 435340 45774212 ~ 45775139 (-) False LOC120552149
TU32528 lncRNA upstream 435340 45774212 ~ 45775197 (-) True LOC120552149
TU32702 lncRNA upstream 845647 46184519 ~ 46184757 (-) True G24264
XM_039778005.1 mRNA downstream 22639 44987963 ~ 45315867 (-) False sez6b
XM_039777999.1 mRNA downstream 22639 45007153 ~ 45315867 (-) False sez6b
XM_039777990.1 mRNA downstream 22639 45007153 ~ 45315867 (-) True sez6b
XM_039777980.1 mRNA downstream 351880 44968198 ~ 44986626 (-) True phf12b
XM_039788116.1 mRNA downstream 513519 44816628 ~ 44824987 (-) True mrps23
XM_039791360.1 mRNA upstream 156665 45495537 ~ 45628896 (-) False myo18ab
XM_039791353.1 mRNA upstream 156665 45495537 ~ 45628896 (-) False myo18ab
XM_039791346.1 mRNA upstream 156665 45495537 ~ 45628896 (-) False myo18ab
XM_039791377.1 mRNA upstream 158096 45496968 ~ 45664024 (-) False myo18ab
XM_039791337.1 mRNA upstream 158096 45496968 ~ 45664024 (-) False myo18ab
unassigned_transcript_136 other downstream 412050 44926385 ~ 44926456 (-) True trnah-gug_5
unassigned_transcript_135 other downstream 412347 44926087 ~ 44926159 (-) True trnah-aug
unassigned_transcript_134 other downstream 412948 44925487 ~ 44925558 (-) True trnah-gug_4
unassigned_transcript_133 other downstream 413246 44925188 ~ 44925260 (-) True trnar-acg_8
unassigned_transcript_132 other downstream 415893 44922541 ~ 44922613 (-) True trnar-acg_7
TU32961 other upstream 1795985 47134857 ~ 47142549 (-) False bet1l

Expression Profile