RNA id: TU32974


Basic Information

Item Value
RNA id TU32974
length 250
lncRNA type inter_gene
GC content 0.51
exon number 1
gene id G24503
representative True

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 47207541 ~ 47207790 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

AGGTTCAGCGCAGCTCCACATAGCCATTTAAACGTGCGGATGCTTCTGATTCCAAACTTCGCCCAGGTGTGTCAGGGACGCAGGTGCCTTCTCTCCTTCCAGAAGTGGAATGAGCTCGAGTCACAGTAACAGTAGGCTATAGGCTAGTCCATGAACAGCTGCCACTAGTCTTTCAGTGCCGCTCTCGCCCTAATCATCTCTCCCGACGGCCTTTATATACAGAggcttgcaaaagtattcatacCCCTTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU32964 lncRNA downstream 754 47205233 ~ 47206787 (-) True G24494
TU32970 lncRNA downstream 8679 47194489 ~ 47198862 (-) True G24499
TU32958 lncRNA downstream 49878 47109647 ~ 47157663 (-) True G24489
TU32823 lncRNA downstream 178930 47028256 ~ 47028611 (-) True G24378
TU32822 lncRNA downstream 187466 47019238 ~ 47020075 (-) True G24377
TU32975 lncRNA upstream 664 47208454 ~ 47208835 (-) True G24504
TU32976 lncRNA upstream 2417 47210207 ~ 47210412 (-) True G24505
TU32977 lncRNA upstream 2833 47210623 ~ 47212849 (-) True G24506
TU32978 lncRNA upstream 5155 47212945 ~ 47213211 (-) True G24507
TU32979 lncRNA upstream 6204 47213994 ~ 47214236 (-) True G24508
XM_039786369.1 mRNA downstream 19178 47172227 ~ 47188363 (-) False bicra
XM_039786405.1 mRNA upstream 8071 47215861 ~ 47225227 (-) True bckdha
XM_039786428.1 mRNA upstream 26763 47234553 ~ 47275950 (-) False LOC120549478
XM_039786438.1 mRNA upstream 26763 47234553 ~ 47270634 (-) True LOC120549478
XM_039786448.1 mRNA upstream 32724 47240514 ~ 47270634 (-) False LOC120549478
XM_039786248.1 mRNA upstream 87895 47295685 ~ 47325453 (-) True dhx34
TU32961 other downstream 64992 47134857 ~ 47142549 (-) False bet1l
unassigned_transcript_136 other downstream 2281085 44926385 ~ 44926456 (-) True trnah-gug_5
unassigned_transcript_135 other downstream 2281382 44926087 ~ 44926159 (-) True trnah-aug
unassigned_transcript_134 other downstream 2281983 44925487 ~ 44925558 (-) True trnah-gug_4
unassigned_transcript_133 other downstream 2282281 44925188 ~ 44925260 (-) True trnar-acg_8

Expression Profile