RNA id: TU32992



Basic Information


Item Value
RNA id TU32992
length 638
lncRNA type sense_over
GC content 0.48
exon number 3
gene id dhx34
representative False

Chromosome Information


Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 47295554 ~ 47325453 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CGACCGCGagccaggacgttcgatgcGGTTGTGccgcagcagaacatctcccagctgccggaatgatctccccttcacttttcaGACTCAAAGGATCTCTACAGTGAGTGTTTACGCACTTTCTGGACCTGTCCTAACTGTGACCTGTACATGCCTCTGACTCCACTGGAACGCATGCAGCACGAGGCCTCCTGCAGGCCGGCAGGGGAACAGCAGCAACCGGAGGAAGAGCCAGAAGGTGGGAAGGCGAGCTCATCCTCCGTGTCCAGTCTTACCAGAGTTTATCACTGCGACGTCTGCGACGAAGATCTGTCGCTCACCTCCACTGAGATCCTCAAACATAAAAGGCAGCACATGTATTCTGTCAAGTAAAGGACAACAGCCTGTCCTGTTGAGGACAGACTTGagtttatactgtacaacaaaGTTGTTGTTTCATTTGTTTCACCGCTCTCCTTCCCTTTTGTACTTGAGGAACTTTATTAAAGTGCTATTGCTTCCCTCTAATGGTCACTGGATGTATTTGCTGTAGCCCTGTGCATTGTTCTGTTCCAATAGGAGAAATACACATTTGTAAAATCTACTTTCCTAAAATAATAGTTCCACTATTTCAACATATTCAACTTAGTCAAAGGCTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU32984 lncRNA downstream 43594 47250386 ~ 47251960 (-) True G24512
TU32979 lncRNA downstream 81318 47213994 ~ 47214236 (-) True G24508
TU32978 lncRNA downstream 82343 47212945 ~ 47213211 (-) True G24507
TU32977 lncRNA downstream 82705 47210623 ~ 47212849 (-) True G24506
TU32976 lncRNA downstream 85142 47210207 ~ 47210412 (-) True G24505
TU32994 lncRNA upstream 60416 47359581 ~ 47365129 (-) True G24518
TU33002 lncRNA upstream 171224 47470389 ~ 47470979 (-) True G24523
TU33033 lncRNA upstream 230869 47530034 ~ 47530348 (-) True G24548
TU33044 lncRNA upstream 266822 47565987 ~ 47566217 (-) True G24557
TU33047 lncRNA upstream 275325 47574490 ~ 47574716 (-) True G24560
XM_039786428.1 mRNA downstream 19604 47234553 ~ 47275950 (-) False LOC120549478
XM_039786438.1 mRNA downstream 24920 47234553 ~ 47270634 (-) True LOC120549478
XM_039786448.1 mRNA downstream 24920 47240514 ~ 47270634 (-) False LOC120549478
XM_039786405.1 mRNA downstream 70327 47215861 ~ 47225227 (-) True bckdha
XM_039786362.1 mRNA downstream 107191 47172227 ~ 47188363 (-) False bicra
XM_039787634.1 mRNA upstream 27093 47326258 ~ 47355399 (-) True st14a
XM_039787683.1 mRNA upstream 60948 47360113 ~ 47469462 (-) False aplp2
XM_039787665.1 mRNA upstream 60948 47360113 ~ 47469462 (-) False aplp2
XM_039787675.1 mRNA upstream 60948 47360113 ~ 47469461 (-) False aplp2
XM_039787656.1 mRNA upstream 60948 47360113 ~ 47469461 (-) False aplp2
TU32961 other downstream 153005 47134857 ~ 47142549 (-) False bet1l
unassigned_transcript_136 other downstream 2369098 44926385 ~ 44926456 (-) True trnah-gug_5
unassigned_transcript_135 other downstream 2369395 44926087 ~ 44926159 (-) True trnah-aug
unassigned_transcript_134 other downstream 2369996 44925487 ~ 44925558 (-) True trnah-gug_4
unassigned_transcript_133 other downstream 2370294 44925188 ~ 44925260 (-) True trnar-acg_8

Expression Profile