RNA id: XM_039777124.1


Basic Information

Item Value
RNA id XM_039777124.1
length 1398
RNA type mRNA
GC content 0.62
exon number 10
gene id LOC120543835
representative True

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 9531021 ~ 9543141 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

tgtgtgtgtgtgtgtaagatacTATAATGGTTCTAACCAAGCTCCCTGGACGAGCCACATGATGAACGGCAGCAATGAGGACTACAGTCAGGACTTTATTCCTGACTTCCCGTATGAACCTGATGCCTTCGACGAGGACCTGCTCAGGGCGAACCCTCAAGGCGGACCGACCCAGATGAGTCCGATGGGAACGCCGGGCGCCAGCCGGCGAGGACGCCAGCTGCCCATCCTCCCGCCCAAAGGAGCGCCGGATAAAATTTTGGCCACGCCTGCTGCAGGAGCACCAATTGCAACTGTAGCTCCTCCCACTCCACATCAACAGGCCCCTCCCCCTGTCAGCAAACaagcccctcctcccccctctgccAATCCTATACCACCTCCGCGTATACGAATCCAAGCCCCGCCTCCTTCTGGACCCACCAACCCCCAACCACCCCAAGTCCAAACACCAGCTCCAGTACCAGCCCCTCCTCTGGTACAAGCCCCGCCCCCAGCTCCTCCTCCGGTACAAGCCCCGCCCCCAGCTCCAGTACCAGCTCCTCCTCCGGTACAAGCCCCGCCCCCAGCTCCAGTACCAGCCCCTCCCACGGTACAAGCCCCGCCCCCAGCTCCTCCTCCGGTACAAGCCCCGCCCCCAGCTCCAGTTCTAGCTCAAGCCCCGGCaccagtttctgctcctgctccGGTAGAAGTCCAAGCCCCGCCCCCAGCTCCTGTTGCAACTCCTGAACCAATCGTACCCCCTGCTCCAGCTCCTACACCTTCTCAAGCCccgcctcctgctcctcctgtaGTCCAATCACTGCCAGCTTCTGAATCTACCGTTCCCCCAACACtggcaccaacaccggcaccaACACCGGCAGCAGCCGCGCCCCCACAAACTCCAGAGCAAGACAGACGCCCATTGACTCCTGGAGGAACCAGAAAAGAGGTCACATGGGAGGACCAGCTGAAAACTGCCAATGGTGTGATGAAGCAGCCGTCCAAGaTGGGGGACAGTCTGTCCTTTAAATCTACAGACAGTGATGTCAGCGATGTGTCTGTCCTCAGGATCAGTGGGGCGGAGCCTCTCGAGGGCCAATCCGAGGAGTTGGGGGCGGGGTCAGAGGGAAGACAGGAAACGTGGTGCCGGCCGGGGGCGGAGCCACGCTGCTGGCCAGCGAATCAGAGGCGGAGGAGTCTGAGCCGGAGACGGAGACGGCCCCTGCAAAGATGCCGCCAGGCACGCCGGGCGCCAAGCCGCCTGGCACCGGAGAGGTTTGTTCTCTGAACCGAAACAACGACGATGACGACGACGACAAGAAGAAGCGCACGGGCATGGCAGCCATGATGCTGGGGATGATCGGGCTGGGGAAGAAGAACCAGAACACACAGGTCAACCCAGAGggtcag

Function

GO: NA

KEGG:

id description
ko00350 Tyrosine metabolism

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU21587 lncRNA downstream 16030 9514341 ~ 9514991 (-) True G15942
TU21584 lncRNA downstream 16853 9507052 ~ 9514168 (-) True G15939
TU21575 lncRNA downstream 85942 9437762 ~ 9445079 (-) True G15930
TU21573 lncRNA downstream 92179 9411493 ~ 9438842 (-) True G15928
TU21593 lncRNA downstream 128317 9401797 ~ 9402704 (-) True G15947
TU21606 lncRNA upstream 2438 9545579 ~ 9546034 (-) False G15952
TU21607 lncRNA upstream 2438 9545579 ~ 9585942 (-) False G15952
TU21616 lncRNA upstream 2438 9545579 ~ 9546034 (-) True G15952
TU21617 lncRNA upstream 2438 9545579 ~ 9546034 (-) False G15952
TU21620 lncRNA upstream 11863 9555004 ~ 9669466 (-) True G15953
XM_039788319.1 mRNA downstream 8790 9513476 ~ 9522231 (-) True LOC120551129
XM_039777530.1 mRNA downstream 28127 9488322 ~ 9502894 (-) True LOC120544027
XM_039777568.1 mRNA downstream 97366 9348209 ~ 9433655 (-) True eif2a
XM_039788278.1 mRNA downstream 329604 9195987 ~ 9201417 (-) True LOC120551100
XM_039776768.1 mRNA downstream 372186 9130984 ~ 9158835 (-) True LOC120543625
XM_039788379.1 mRNA upstream 133694 9676835 ~ 9680842 (-) True LOC120551163
XM_039788414.1 mRNA upstream 304857 9847998 ~ 9851668 (-) True dharma
XM_039824593.1 mRNA upstream 610750 10153891 ~ 10178798 (-) False zgc:162698
XM_039824587.1 mRNA upstream 610750 10153891 ~ 10178795 (-) True zgc:162698
XM_039824601.1 mRNA upstream 641392 10184533 ~ 10201584 (-) False LOC120574297
TU21571 other downstream 13051 9513504 ~ 9517970 (-) False LOC120551129
TU21567 other downstream 97419 9430861 ~ 9433602 (-) False eif2a
TU21546 other downstream 292237 9237967 ~ 9238784 (-) True G15903
TU21489 other downstream 386901 9131539 ~ 9144120 (-) False LOC120543625
TU21433 other downstream 484588 8971914 ~ 9046433 (-) True G15820
XR_005638376.1 other upstream 88782 9631923 ~ 9632028 (-) True LOC120554346
TU21765 other upstream 593547 10136688 ~ 10138347 (-) True G16066
TU21762 other upstream 597035 10140176 ~ 10149571 (-) True G16064
TU21797 other upstream 783112 10326253 ~ 10330847 (-) False LOC120574316
TU21879 other upstream 878921 10422062 ~ 10424770 (-) True G16143

Expression Profile