Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039778977.1 |
| length | 957 |
| RNA type | mRNA |
| GC content | 0.35 |
| exon number | 1 |
| gene id | LOC120545036 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053113.1 |
| NCBI id | CM020910.1 |
| chromosome length | 48524041 |
| location | 5918054 ~ 5919010 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0050877 | nervous system process | biological_process |
| GO:0050953 | sensory perception of light stimulus | biological_process |
| GO:0007600 | sensory perception | biological_process |
| GO:0007601 | visual perception | biological_process |
| GO:0003008 | system process | biological_process |
| id | description |
|---|---|
| ko04744 | Phototransduction |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU19811 | lncRNA | downstream | 196279 | 5721239 ~ 5721775 (-) | True | G14762 |
| TU19798 | lncRNA | downstream | 237280 | 5674449 ~ 5680774 (-) | True | LOC120549106 |
| XR_005637329.1 | lncRNA | downstream | 237288 | 5675410 ~ 5680766 (-) | False | LOC120549106 |
| TU19791 | lncRNA | downstream | 243781 | 5633508 ~ 5674273 (-) | True | G14746 |
| TU19874 | lncRNA | upstream | 107860 | 6026870 ~ 6030460 (-) | True | G14816 |
| TU19880 | lncRNA | upstream | 118190 | 6037200 ~ 6038733 (-) | True | G14820 |
| TU19881 | lncRNA | upstream | 163483 | 6082493 ~ 6167461 (-) | True | G14821 |
| TU19882 | lncRNA | upstream | 163483 | 6082493 ~ 6164644 (-) | False | G14821 |
| TU19894 | lncRNA | upstream | 302345 | 6221355 ~ 6222054 (-) | True | G14832 |
| XM_039786496.1 | mRNA | downstream | 28077 | 5889051 ~ 5889977 (-) | True | LOC120549505 |
| XM_039786470.1 | mRNA | downstream | 43104 | 5873798 ~ 5874950 (-) | True | LOC120549493 |
| XM_039786507.1 | mRNA | downstream | 53769 | 5863359 ~ 5864285 (-) | True | LOC120549514 |
| XM_039778954.1 | mRNA | downstream | 59114 | 5858011 ~ 5858940 (-) | True | LOC120545023 |
| XM_039778944.1 | mRNA | downstream | 71137 | 5842654 ~ 5846917 (-) | True | LOC120545016 |
| XM_039778991.1 | mRNA | upstream | 20662 | 5939672 ~ 5948863 (-) | True | LOC120545043 |
| XM_039779057.1 | mRNA | upstream | 43910 | 5962920 ~ 5963870 (-) | True | LOC120545063 |
| XM_039779067.1 | mRNA | upstream | 51980 | 5970990 ~ 5971916 (-) | True | LOC120545072 |
| XM_039779414.1 | mRNA | upstream | 356882 | 6275892 ~ 6276845 (-) | True | LOC120545232 |
| XM_039788155.1 | mRNA | upstream | 440233 | 6359243 ~ 6380456 (-) | True | pgm2l1 |
| TU19803 | other | downstream | 212077 | 5703387 ~ 5705977 (-) | True | G14754 |
| TU19757 | other | downstream | 384227 | 5510716 ~ 5533827 (-) | False | G14722 |
| TU19742 | other | downstream | 414624 | 5489256 ~ 5503430 (-) | True | LOC120554300 |
| TU19530 | other | downstream | 612685 | 5214769 ~ 5305369 (-) | True | G14553 |
| TU19570 | other | downstream | 806075 | 5062988 ~ 5111979 (-) | True | G14579 |
| TU19916 | other | upstream | 383339 | 6302349 ~ 6302812 (-) | True | G14853 |
| TU20278 | other | upstream | 1101973 | 7020983 ~ 7032467 (-) | False | atg16l2 |
| TU20279 | other | upstream | 1101973 | 7020983 ~ 7032467 (-) | False | atg16l2 |
| XR_005638460.1 | other | upstream | 1123072 | 7042082 ~ 7042373 (-) | True | LOC120554469 |
| TU20319 | other | upstream | 1183356 | 7102366 ~ 7104090 (-) | True | G15110 |
