Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039779942.1 |
| length | 948 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 1 |
| gene id | LOC120545533 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053113.1 |
| NCBI id | CM020910.1 |
| chromosome length | 48524041 |
| location | 6893550 ~ 6894497 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0007186 | G protein-coupled receptor signaling pathway | biological_process |
| GO:0050911 | detection of chemical stimulus involved in sensory perception of smell | biological_process |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0004930 | G protein-coupled receptor activity | molecular_function |
| GO:0004984 | olfactory receptor activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_005641380.1 | lncRNA | upstream | 202659 | 6690031 ~ 6690891 (+) | True | LOC120572178 |
| TU20060 | lncRNA | upstream | 315097 | 6578222 ~ 6578453 (+) | True | G14939 |
| TU20051 | lncRNA | upstream | 381664 | 6511135 ~ 6511886 (+) | True | G14930 |
| TU20049 | lncRNA | upstream | 383576 | 6508571 ~ 6509974 (+) | True | G14928 |
| TU20037 | lncRNA | upstream | 398900 | 6494388 ~ 6494650 (+) | True | G14917 |
| TU20157 | lncRNA | downstream | 49825 | 6944322 ~ 6991913 (+) | True | G15012 |
| TU20167 | lncRNA | downstream | 83302 | 6977799 ~ 6978105 (+) | True | G15021 |
| TU20179 | lncRNA | downstream | 122298 | 7016795 ~ 7017311 (+) | True | G15032 |
| TU20202 | lncRNA | downstream | 157689 | 7052186 ~ 7053965 (+) | True | G15050 |
| TU20174 | lncRNA | downstream | 198631 | 7093128 ~ 7093466 (+) | True | G15028 |
| XM_039779880.1 | mRNA | upstream | 118605 | 6774016 ~ 6774945 (+) | True | LOC120545500 |
| XM_039779865.1 | mRNA | upstream | 126169 | 6766452 ~ 6767381 (+) | True | LOC120545496 |
| XM_039779839.1 | mRNA | upstream | 158705 | 6729163 ~ 6734845 (+) | True | LOC120545480 |
| XM_039779826.1 | mRNA | upstream | 168827 | 6723794 ~ 6724723 (+) | True | LOC120545475 |
| XM_039779777.1 | mRNA | upstream | 184222 | 6699502 ~ 6709328 (+) | True | LOC120545448 |
| XM_039779950.1 | mRNA | downstream | 4141 | 6898638 ~ 6899582 (+) | True | LOC120545541 |
| XM_039780036.1 | mRNA | downstream | 16046 | 6910543 ~ 6911490 (+) | True | LOC120545568 |
| XM_039776759.1 | mRNA | downstream | 19187 | 6913684 ~ 6929585 (+) | True | LOC120543617 |
| XM_039777245.1 | mRNA | downstream | 40549 | 6935046 ~ 6941434 (+) | True | or55e1 |
| XM_039780137.1 | mRNA | downstream | 471299 | 7365796 ~ 7396634 (+) | True | LOC120545619 |
| TU19929 | other | upstream | 477480 | 6414587 ~ 6416070 (+) | False | spcs2 |
| TU19934 | other | upstream | 478006 | 6414587 ~ 6415544 (+) | False | spcs2 |
| TU19935 | other | upstream | 478006 | 6414587 ~ 6415544 (+) | False | spcs2 |
| TU19963 | other | upstream | 480175 | 6408043 ~ 6413375 (+) | False | spcs2 |
| TU19140 | other | upstream | 1371669 | 5510757 ~ 5521881 (+) | True | G14344 |
| TU20165 | other | downstream | 78348 | 6972845 ~ 6989396 (+) | True | G15019 |
| TU20402 | other | downstream | 503604 | 7398101 ~ 7399141 (+) | True | G15173 |
| unassigned_transcript_83 | other | downstream | 517333 | 7411830 ~ 7411912 (+) | True | trnal-cag |
| TU20486 | other | downstream | 596868 | 7491365 ~ 7492057 (+) | True | G15234 |
| TU20573 | other | downstream | 932113 | 7826610 ~ 7827290 (+) | False | LOC120543808 |
