RNA id: XM_039783238.1


Basic Information

Item Value
RNA id XM_039783238.1
length 2063
RNA type mRNA
GC content 0.49
exon number 14
gene id akt2
representative False

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 21580379 ~ 21599999 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

CAACGATGTGCCTGTCTTTGGAAGGTATTACATGATATAGTTGTTTTTGATCTGAGCCACTGTCAGACTCTTGACCAATAGGAACAGTTTGCACAATTTCCACCAGCTTCTCTGCAGCCCCCTCCCAACCCAGACAGTCCTCTGCCCCAGCATGAATGAAGTCAGTGTTGTGAGAGAAGGATGGCTCCATAAGAGAGGTGAATACATTAAAACATGGAGGCCTCGGTACTTCATCTTAAAGAGCGACGGCTCCTTCATTGGCTACAAAGAGAAGCCTGAGGTGTCCAGTGACCACAGCCTCCCACCACTCAACAACTTCTCTGTCGCAGAATGCCAGCTGATGAAAACGGAGCGCCCAAGGCCCAATACGTTTGTCATCCGTTGCCTGCAATGGACCTCTGTTATTGAGCGCACCTTCCATGTAGACAGCAATGAGGAGAGGGAGGAATGGATGCGATCGATCCAGGCAGTGGCAAATAGCCTGAAGAGTCAGCAGCAGGATGAGGAGCCCATGGAGATTAAATTTGGCTCACCAAGTGACAGCAGTGGCACAGAGGAGATGGAGATTGCTGTGTCCAAATCCCGCACAAAAGTGACCATGAGTGACTTTGACTATCTGAAGCTGCTGGGAAAGGGGACATTTGGTAAAGTGATCCTGGTGAAGGAGAAGGCCACAGGGATGTACTACGCCATGAAAATCCTCCGCAAGGAAGTCATCATTGCTAAAGATGAAGTGGCACACACAGTTACAGAAAGCAGAGTTCTCCAAAATACGCGGCATCCCTTTCTAACGACACTAAAATATGCATTTCAAACGCATGACCGGCTATGCTTTGTAATGGAGTATGCAAATGGAGGAGAACTCTTCTTTCACTTATCCCGGGACAGAGTGTTCACAGAAGACAGAGCTAGATTCTATGGTGCAGAAATAGTGTCAGCACTGGAGTACCTACACTCACGCAATGTAGTTTACAGAGATTTAAAGCTGGAGAACCTCATGTTAGATAAGGACGGCCACATAAAGATAACAGATTTTGGGTTGTGTAAAGAGGGGATCACAGACGGTGCCACTATGAAAACCTTCTGTGGAACACCGGAGTACCTGGCACCAGAGGTGCTAGAAGACAATGACTACGGACGAGCGGTGGACTGGTGGGGACTGGGCGTGGTCATGTATGAGATGATGTGTGGTCGGTTGCCCTTCTACAACCAGGACCATGAGCGTCTCTTTGAGCTTATCCTCATGGAGGAGATCCGCTTCCCCAAGAACCTGGCTCCGGAAGCCAAGGCCCTGCTGGCCGGCCTGCTCAAAAAGGATCCCAAACAAAGGCTTGGTGGCGGTCCAGACGATGCCAAAGAAGTGATGAGCCACAAGTTCTTTACATCTATCAACTGGCAGGATGTTCTTGAAAAAAAGCTTATTCCACCCTTCAAGCCCCAAGTAACATCAGAGACGGACACGCGTTACTTCGATGATGAGTTCACAGCACAAACCATAACAATAACTCCCCCTGACAAGTATGACAGTTTAGATGTCGAGGATTCAGATCAGCGCACGCACTTCCCTCAGTTCTCCTACTCTGCCAGCATACGGGAATGATCACTCAGACTCTTGAACAAGCAGGCAGGCTAACACACGATCAcaatcccacatacacactTGCACTGCTGGGGaacgacacaaacacaaactggcACAAGACACATTTTCATTCGGTCTTTAACGCACGTACACACGcagacacgtacacacacacacccacatccTGGCTATTCAGACAAGACAGGGATCATCAAGTATGAAATGAACACACAGGCCGTGACTGACTGACCTCAGCAGGTTTATGTGGATAGACTGGCAGCTTTGCGTCTGTGCGTCCTCTCAGGGTTGGCTTTAGGCTTCCCTGCAGGACCTCTGCTGCACTACACTGGGGTACCACATCAAAGCCttgacactttgaaaaccaGGTTATGCCAGCAAGTACCACCTCTTTACCAGCTGTACCcatgctacacacacaaaataccaaCCCATGCATagactgcatatatatatatatata

Function

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU25431 lncRNA downstream 156 21527455 ~ 21583403 (-) True G18591
XR_005641345.1 lncRNA downstream 50804 21530284 ~ 21532755 (-) False LOC120572042
TU25432 lncRNA downstream 50811 21529997 ~ 21532748 (-) True LOC120572042
TU25298 lncRNA downstream 172360 21410908 ~ 21411199 (-) True G18492
TU25204 lncRNA downstream 467565 21113372 ~ 21115994 (-) True G18429
TU25448 lncRNA upstream 11769 21611137 ~ 21612250 (-) False LOC120572205
TU25483 lncRNA upstream 33612 21632980 ~ 21695722 (-) True G18626
TU25489 lncRNA upstream 52335 21651703 ~ 21652866 (-) True G18631
TU25545 lncRNA upstream 220621 21819989 ~ 21878764 (-) True G18669
TU25654 lncRNA upstream 548671 22148039 ~ 22148297 (-) True G18758
XM_039791777.1 mRNA downstream 5698 21573329 ~ 21577861 (-) False LOC120553405
XM_039791768.1 mRNA downstream 5699 21573329 ~ 21577860 (-) True LOC120553405
XM_039791792.1 mRNA downstream 5705 21573329 ~ 21577854 (-) False LOC120553405
XM_039791785.1 mRNA downstream 6321 21573329 ~ 21577238 (-) False LOC120553405
XM_039791430.1 mRNA downstream 10879 21565551 ~ 21572680 (-) False si:ch211-132b12.7
XM_039792047.1 mRNA upstream 1161 21600529 ~ 21607740 (-) True dhx40
XM_039821926.1 mRNA upstream 8676 21608044 ~ 21610638 (-) True LOC120572601
XM_039821932.1 mRNA upstream 8676 21608044 ~ 21610635 (-) False LOC120572601
XM_039821940.1 mRNA upstream 8676 21608044 ~ 21610634 (-) False LOC120572601
XM_039821452.1 mRNA upstream 11446 21610814 ~ 21615246 (-) False LOC120572205
TU25281 other downstream 321636 21246839 ~ 21261923 (-) False slc6a4a
TU25187 other downstream 486358 21094182 ~ 21097201 (-) True si:ch1073-340i21.1
TU25100 other downstream 1442047 20137342 ~ 20141512 (-) False LOC120547993
XR_005637451.1 other downstream 1773429 19802713 ~ 19810130 (-) False si:ch211-11n16.2
TU24394 other downstream 3360705 18205582 ~ 18222854 (-) False LOC120545639
TU25499 other upstream 64727 21664095 ~ 21671479 (-) False gdpd5b
TU25608 other upstream 402536 22001904 ~ 22007171 (-) False LOC120551419
TU25812 other upstream 1539845 23139213 ~ 23148515 (-) True G18885
TU25813 other upstream 1540032 23139400 ~ 23148515 (-) False G18885
TU25890 other upstream 1647235 23246603 ~ 23252420 (-) True G18948

Expression Profile