RNA id: XM_039788414.1


Basic Information

Item Value
RNA id XM_039788414.1
length 1169
RNA type mRNA
GC content 0.56
exon number 3
gene id dharma
representative True

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 9847998 ~ 9851668 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ATGGACCGAGGCAGCACACTGTCCGACTTCAGCATCGAGCGCATCCTCTCCCCGCAGCTCGGACACAAGAATCCGCCGGTGATGGACTACGCACCGGGTGGATACTTCCACGGGATCCCCGGCGGATTTTGGACTCTTTACCCCGGCAACCTCAGCCCTCCTGCCCCGGCTCCGGAACCGGCTCCGATCCGGGCCCCGGTCCCGGTCCCAGGCTGCCTGCAGTACCGAGGGATGCGCTTTGTGGACGCCTTTCTCCCGTATGGAGCAGCCGGTTTCCATCCCACAGACTTCACCAACTTGTACCCAAACTCCGGAGAGCGCATGCGCTTCAGCACCCAGGACTCTGCAGATCCTCAGCAGTTGGCAGGTTACCATAGTAACCATCAGGCCATGGTGTCCGCTGAGTCGCAGCTGCGTCAGAAGTCCCGGATGAGGACGGTGTTCACCGACGGTCAGACCAAGCGGCTCGAGGTGCTGTTCGCGCTCAGCGACTATCCGCCGGCGGAGACTCGCGATGAGCTCGCGAGGAGCACCGGGCTGACCGAGGAGACAGTCAGGATTTGGTTTAAGAACCGCAGAGCCAGGAGGAAGCGGCAGCGCAGCAGGTCAAAGGACAAACCCTCCTCCCCTTCGCCCAGCGGCGCCGGAGCCGAGAACAAGTTCTTCGCCTCCTTCCTCTGAACGCGGACGGACTGTCCAGTCTGCTCAGGGACGCGTTACTATggatcccacgtaacttctaggcaagtcgaAGCGGCCCGATTGGTCGGGGTTGGGCATTAACCTCgagtggttagggttagggtagctGACTGGTCAGGGGACAGGACCTGACGTTAAGCATGGACAGCTGGCCAATGGTAGcctgtgaatgctattgaagggcgggacttgcctatAAGTTGACGTAGGTTCCACAATAACGCCTCAGGGACACTTCGGACTGCAGAACGTTTCCTGAACTGTGACGATGCATTCAGAAGCCGCCGGGAAAAGTCAGACACCCGAGAGTCCAAACTAAAACCCCTTGTGGACAGTTCAGATCTCTCCCCACTGACTGTTTACAGTGttgatttttaaattattttgtatttttagcgTAATTTATTGAATTCTTGTGTATTAAAGATTCCAGTTTGTAGGTTTTCATAAAACAAGCATCATTTGTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU21664 lncRNA downstream 42099 9769019 ~ 9805899 (-) False G15983
TU21665 lncRNA downstream 42099 9769019 ~ 9805899 (-) False G15983
TU21666 lncRNA downstream 42099 9769019 ~ 9805899 (-) False G15983
TU21667 lncRNA downstream 42099 9769019 ~ 9805899 (-) False G15983
TU21669 lncRNA downstream 42099 9797284 ~ 9805899 (-) True G15983
TU21657 lncRNA upstream 1380 9853048 ~ 9969138 (-) False G15977
TU21650 lncRNA upstream 15176 9866844 ~ 9895794 (-) False G15977
TU21656 lncRNA upstream 15176 9866844 ~ 9944527 (-) False G15977
TU21653 lncRNA upstream 35954 9887622 ~ 9944527 (-) False G15977
TU21684 lncRNA upstream 89012 9940680 ~ 9953877 (-) False G15996
XM_039788379.1 mRNA downstream 167156 9676835 ~ 9680842 (-) True LOC120551163
XM_039777124.1 mRNA downstream 304857 9531021 ~ 9543141 (-) True LOC120543835
XM_039788333.1 mRNA downstream 316903 9524207 ~ 9531095 (-) True LOC120551135
XM_039788319.1 mRNA downstream 325767 9513476 ~ 9522231 (-) True LOC120551129
XM_039777530.1 mRNA downstream 345104 9488322 ~ 9502894 (-) True LOC120544027
XM_039824593.1 mRNA upstream 302223 10153891 ~ 10178798 (-) False zgc:162698
XM_039824587.1 mRNA upstream 302223 10153891 ~ 10178795 (-) True zgc:162698
XM_039824601.1 mRNA upstream 332865 10184533 ~ 10201584 (-) False LOC120574297
XM_039824600.1 mRNA upstream 332865 10184533 ~ 10201584 (-) True LOC120574297
XM_039788438.1 mRNA upstream 375560 10227228 ~ 10248071 (-) True LOC120551203
XR_005638376.1 other downstream 215970 9631923 ~ 9632028 (-) True LOC120554346
TU21571 other downstream 330028 9513504 ~ 9517970 (-) False LOC120551129
TU21567 other downstream 414396 9430861 ~ 9433602 (-) False eif2a
TU21546 other downstream 609214 9237967 ~ 9238784 (-) True G15903
TU21489 other downstream 703878 9131539 ~ 9144120 (-) False LOC120543625
TU21765 other upstream 285020 10136688 ~ 10138347 (-) True G16066
TU21762 other upstream 288508 10140176 ~ 10149571 (-) True G16064
TU21797 other upstream 474585 10326253 ~ 10330847 (-) False LOC120574316
TU21879 other upstream 570394 10422062 ~ 10424770 (-) True G16143
TU22339 other upstream 2097669 11949337 ~ 11955578 (-) True G16407

Expression Profile