RNA id: XM_039791241.1


Basic Information

Item Value
RNA id XM_039791241.1
length 8374
RNA type mRNA
GC content 0.56
exon number 49
gene id myo18ab
representative False

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 45495537 ~ 45664024 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GACACGGTGAGGCTGAAGGTGCAGCCCATCCTGGAGCTGAGCGAGCTGAGCCGCTGCTGGCTGAGGAACACCGAGGGGCTGCGCAGGGAGGCCAGACATctcccctccacctcctcttcctcctgctctCATCTCATCCGTCACAGCCCATGACAGCAGATCAGCCAACATGGCATTCTCACATCGCTTTTCCTTCTGGGAGCAAAAGATTAAAGAAGATAACAAGCCAGGAAGCAAAAGTTCAGACAGTGAAGGGCTGCCCAGCCGGGCCAAGTCTGTGCCAGCTCTAGACCCTGGCAGGGGGTTATTCCGGTCAACAAGTCCCCCATCAGTTTCCCATACGGAGTCGAAAGCCCGGGTCAGGAGTCCCTCCCCACCTAAAGTCAGGACACCTGTTAAAGTACCTGAACGCTTCAAAAGCCCTGAGCCACTGTCAAAGAAGGCAGAGCAAATTAGGAGTCCTGAACCACCACAAGCTCCTCTGAGCCCACAGCCAGTTATGAACGGTGAGCGAGAGCAAAATGGCATAATTGGCAAAAGCGTGGCCAACGGTACAGCCAATAGTGATATTAACGTTCCAGGCAGCAGCACCAACCAGATGGATACCACGGAGGACAAGGGTCTGACACGTAAGAAAGTAGTGAAGGTGGTTCGTCGAGTTGTCAGGAAGGTCCTGCCCGCAGAAGAGGACGAGACCACTGTGCCAACACAACCATCAGGCAAAGCACCACAAGCAGCCAGGCCTACTGCCGAACCAGTTAAAGCAATGCCAGCACCAGCTCCAGTGCCGAAGGCCCCCATGATGTCAGGGTTCTCTTTTAAACATGACGCCGTCAAAACGGAAGACGACATTTCACGAGGGTTGACAAACCTCATGGTCCGAGGCAGGACAAGGGAGCCCCGGCCACGAATATGCAAGGATGATCGACCAGAAAAATTAGAGTTGGAGAAGATAAatgagaagaaagaggaaaaggttGTTGAACCGCAGCAGATAAAAGAGAAGAAGGAGGATAAAACCACCGTAAAGCCACAGGAGGTCAATTCCAAACCTACAAACTCTGGTCCAGGCGTACAGCTTGTCAAATCTCCTGTGGCTGCTGTAAACCCAACCAGTATGGCTTCTGAGCATGCGGCACCAACATCTTCCAAATCGACCCATTCCAGACCCTCATCTCTCCCACCAGTTGTTGGCTTTATCCCGGCTCCTAAGCCCTCACCCTTGTCACCGCCTCCTGGCTTCATACCTGCACCAAAACCAACTGCTGCAACAAAACCCGCCTCTAAAAATCTTCCGTCTACCACCCCAGTGGCCCAGAAATCTTCCTTTGTCTCTCCTTCATCACGTTTCATCCCAGCTCCTAAACCCTCTCCGCTCAAAACTCCTGTGAGCCCCGATCCTCTCCGTCCCACTCTTAGTCCACTGTCTCTCCCTCAAGGAGTCATTTCAATTCAACAAACTGCTGTCAGTCAACAAGAGGAGGAGCCGCTCAGTCCCACCGAGGAAGCTCAGAGACGCCTGATGAGGATCTTCAATGCCCCTCTGGAGCAGGCTGTCAGTGTTTCGTCTTCTGTCCAAGCCCCCGCAGCCCTGCAGCCCCCCCAGGTACCGCGGCCCTCCAGCCTTCCTCTGGGCCTCCTGGCTGGTGTTTGTACTCGTGTGACTTGTCGGAGTGGATCTGTGGAAGAGGACCCTGTGGCCCTCCTTCTGGCATCTCATGCTGCAGCTCAGCAGCCACAGGTGAAGACAGAGGAGCAGATCGCAGCCGAGCAGGCCTGGTATGGATCCGAGAAAGTCTGGCTGGTCCACAAAGATGGCTTCTCCCTGGCCACCGTGGTGAAGACGGAGGCTGGCTCCCTGCCAGAGGGCAAGGTGAAAATCCAACTGGAGCATGATGGGACAGTACTGGAAGTGGACGAGGACGACGTAGAAAAGGCCAACCCTCCATCATACAACCGATCAGAGGACCTGGCTTCACTGCTCTACCTGAATGAATCCAGTGTGATGCACTGCCTGAGGCAGCGCTACGGAGGTAACCTCATCCACACCTACGCTGGACTCAATACGGTCATCATCAACCCCCTAAGCACACCCTCCATGTACTCTGAGAAGGTGATGCACATGTTCAAAGGCTGTCGGCGCGATGACTCTGCACCTCATATCTACTCAGTGGCCCAGTCGGCCTATCGCAACCTGCTCACCACCCGGCAGGACCAGTCCATCGTGCTGCTGGGCAAGTCCGGCAGCGGCAAGACCACCAACTGCCAGCACCTGGTCCAGTACCTGGTCTCCATCGCCGGCAGCACGGGCAAAATCTTCTCCGCTGAGAAGTGGCAGGCGGTCTACACCATCCTGGAGGCTTTCGGCAACAGCTCCACCTCTATGAACACCAACGCCAGCCGCTTCTCCCACATAGTGTCCCTCGACTTTGACCAGGCTGGCCAGGTGGCCTCCGCGTCTatccagACGATGCTGCTGGAGAAACTGCGGGTGAGCAAACGGCCCGAGGCAGAGTCCACCTTCAACGTCTTCTACTACATGATGGCCGGAGCCGACAGCAGCCTGAGGACCGAGCTGCACTTTAACCACCTGGCTGAGAATAGTGCTTTTGGGATCCTACCGCAGTCTAAGGCTGAAGACAAGCAGCGCGCCTCGCAGCAGTTCACCAAGCTGCAGGCAGCCATGAAGGTGCTGGGCATCTCCGGGGAGGAGCAGAAGGCCCTCTGGCTCATCCTGGGGGCCGTGTACCACTTGGGGGCCGCAGGAGCCACTAAAGTCGGAGATGAAGCGGGACGTAGGCAATTTGCCCGTCATGAGTGGGCCCAGAAGGCGGCCTACCTGCTGGGCTGTACCTTAGAGGAGCTGTCCTCCTCCATCTTTAAGCACCAGGCCAAAGGACTGCAGCACTCCACCTCCTTCAGAGGGGGGCCAGACGAGGCCGGCCAAGGCGACAGCTCAGGCTCTAAGGTCACAGCTCTGGAGTGTTTGGAGGCCATGGCATCCGGACTGTACTCAGAGCTCTTCACTCTCGTCATCTCCCTAATTAACAGGGCTCTGAAGTCCAGCCAGCACTCTCTGTGCTCCCTGCTGATCGTGGACACTCCGGGTTTCCAGAACCCCCGGCTGGCTCAGCAGCAGCGGGGAGCCACGTTTGAAGAGCTCTGCCACAACTACACCCAGGAGAGGCTGCAGACCCTGTTCCATGAACGCACCTTCGTCCAGGAGCTGGACCGATACAAGGAGGAAAACATAGAGCTTGCTTTAGATGACATAGAGTCCAGTACCTCACTGTCTGTAGCAGCTATTGACCAAGCCTCAACCCAAGCTCTGGTGCGCACTCTGGCCAGGACGGATGAGGCTCGAGGCCTTCTGTGGCTGATGGAGGAGGAGGCCGTTCAGCCTGGAGGTTCAGAGGAAACCATGCTGGAGAGACTCTTCAGCTACTACGGCTCTGTGCAGGGAGAAAACAAAGAAGCCAGTCTGCTGCTGCGAGGAGAGAAGCCCCACCTCTTCCTGTTGGGTCACAGCCACGGGACAGACTGGGTGGAGTACAACGCTCAGGGCTGGCTGAGCCATGCCAAGCACAACCCTGCTGCCCAGAACGCTGCCACACTGCTGCAGGACTCCCAGAAGAAGAACATCAGTGGGCTGTTTATGGGCCGGGCCAGCGGGGCCACAGTGTTGTCGGGCTCCATCGCTGGTCTGGAGGGCAGCTCCCAGCTTGCCCTGCGACGAGCCACCAGCATGAGGAAAACCTTCACCACAGGCGTGGCTGCGGTCAAGAAGAAGAGCCTGTGTATCCAGGTCAAACTCCAAGTGGACGCTCTGATTGACATGGTGCGTCGTTCCAGGGTTCACTTCGTTCACTGCCTGCTGCCCAAAGCAGAGGCAGTGAGTGGTGGAGGTGAGCCCCGTGTGACGCATGGAGAAAGCCCCGACTCGGGCCTCATGACTTTGGACGTTGGCCTCCTGAGAGCTCAGCTCCGAGGATCCAAGCTGCTGGATGCACTGCGCATCTACAGGCAAGGATACCCAGACCACATGGTGTTTTCTGAGTTCCGCAGGCGCTTTGATGTCCTGGCACCACATCTGACCAAGAAGCATGGCCGCCACTACATTGTCACAGATGAGAAGAGGGCGGTGGAGGAGTTGCTGGAGTCCTTGGATCTGGAGAAGAGCAGCTACCACATGGGGCTGAGCAGGGTGTTCTTCAGAGCGGGGACTCTGTCCAGGCTGGAGGAGCAGCGAGACGTTCAGACCAGGAGGAATATCTCTCTGTTCCAGGCTGCCTGCAGGGGATACCTGTCCAGACAGGCCTTCAAGAAGAGGAAGATCCAGGATCTGGCCATCCGCTGCATCCAGAAGAACATAAAGAAGAATCGCGGTGTCAAAGGCTGGCCATGGTGGAAGCTCTTCACCACTGTCAGACCTCTAATAGAGGTGCAACTCACTGAGGAACAGATCCGCGGCAAGGAtgaagagaTCCAGCACCTGAAGCAGAAGCTGGAGAaggtggagaaagagaggaacgAGCTGAGACTCAACAGCGACCGCCTTGAGAGCCGGATCTCAGAGCTGTCATCAGAGCTGGCTGATGAGCGGAACACCGGGGAGTCAGCCTCCCAGCTGCTGGAGACCGAAACTTCTGAGAGACTTCGCCTGGAGAAGGACACGAAGGACCTGCAgGCCAAGTTTGACAGCATGAAGAAACAGATGGAGTCCATGGAGATGGAGGTGATGGAGGCTCGACTCATCAGGGCGTCTGAACTCAACGGAGAGATGGAAGATGACGACACAGGCGGTGAGTGGAGGCTGAAGTATGAGCGAGCCATCAGGGAGATTGAGTTCACCAAGAAGAGACTGCAGCAGGAGTGTGATGACAAGCTGGAGGTGGAGCAGCAGAACAAGCGGCAGCTGGAGAGGAGGATCACCGACCTGCAGGCCGACAACGAGGAGTCCCAGCGAAACATCTCGCAGCTGAAGAAGAAAACCCAGCGGCTCACGTCTGAACTGCAGGACACCAAACTTCACCTGGAGGGCCAACAGAGCCGCAACCACGACCTGGAGAAGAAGCAGAGGAaGTTTGACGGCGAGCTGAGTATGGCCCAGGAGGAggtgcagagggagaggagcctgaGGGAGAAACTGGCCCGAGAGAAAGACATGCTGGCCGGAGAGGCCTTCAGCCTCCGACAGCAGCTGGAGGACAAGGACCTGGAGGTGTGTGCAGTCAACGTGAAGCTGGAGCAGCTGGACGCCGAGCTGCACGACCTCAACTCCCAGGAGTCCAAGGATGAGGCTTCTCTGGCCAAGGTGAGGAAGCAGCTCCGCGACATGGAGGCCAAGCTGAAAGACCAGGAGGAGGAGCTGGACGAGCAGGCCGGCACCATCCAGATGTTGGAGCAGGCCAAGCTTCGtctggagatggagatggagcgCTTGCGTCAGACTCATTCCAAGGAGGTGGAGAGCAAAGACGACGAGGTGGAGGAGATCAGGCAGTCCTGCAGCAAGAAGCTGAAGCAAATGGAAGTCCAGCTTGAAGAAGAGTACGACGAGAAGCAGAAGGTGCtgaaggagaagagagagctgGAGTCCAAGCTTCTGTCAGCACAGGACAAGGTGAGGACTGGTGACGTAGATGCTGAGAAGCGTCTGAGGAAGGACCTGAAGAGAACCAAGGCTCTGCTGGCTGATGCCCAGATCATGTTGGACCACATCAAGAACAACGCACCAAGCAAGAGGGAGATCGCCCAGCTCAAAAACCAGCTAGAGGAGTCTGAGTTCACCTGTGCGACGGCAGTTAAAGCTCGTAAGTCCatggaggtggagattgaagACCTGCACGTTCAGATGGATGACATCTCCAAAACCAAACAGGCGCTGGAGGAGCAGCTGAGTCGTCTGCAGAGGGAGAAGAACGAGCTGCAGTCCAGGATGGAGGAGGACCAGGAGGACCTCAACGAGCTGATGAAGAAACACAAGGCCGCCGTGGCCCAGTCAGCCCAGAATCTGGCTCAGATCAGTGACCTACAAGCCCAGCTGGAGGAGGCCCTCAAGGAGAAGCAGGAGGTTCAGGAGAAGGTGCAAGCCCTCCAGAGCCAGCTGGAGTTCCAGGAGCAGTCAATGGTGGAGAAATCCCTTGTCAGCCGGCAGGAGGCCAAGATCCGTGAGCTGGAGACCAAGCTGGAGTTTGAGAAGACACAGGTCAAACGCTTGGAGAGCCTTGTAGCACGTCTTAAGGAGAATTTGGAGAAGCTGACAGAGGAACGAGACCAGCGCAGCAGCGGCGAGAATCGTGAGAAGGAACAGAACAAACGCCTGCAGAGACAGATCCGCGACATCAAAGAGGAGACAGGGGAACTGGCCAAAAAGGAAGCCGAGGCCAGCCGCAAAAAACACGAGCTGGAAATGGACATAGAGAGCTTAGAGGCTGCTAACCAGAGCCTTCAGGCAGACCTCAAGCTGGCCTTCAAAAGGATCGGCGACCTGCAGGCGGCCATCGAGGACGAGATGGAGAGTGACGACAATGAAGACCTTATCAACAGTTTGCAAGACATGGTGACAAAGTATCAGAAAAGGCAGAACAGAGCTCCGGGGGATTCAGACACAGACTCGGAGGTGGAGGATCGTGTGGACGGGGTGAAGTCCTGGTTGTCTAAAAGCAAAGGTTCCGCCAAGAACCTCTCCGATGACGGCAGCCTCAAGAGCTCCAGATTTGCTGTAAATGTAGACGCAAAGGAAGGGAAAGAGTGGAAAGAGGGTAAGGAATGGAAAGAACTTAATAAAGAGGGCAAAGAGGTAGAGCCAAGCAGGCCAATGTCGGTGATGAGCTCGCTCAGCTACAGAAAACGCTCCAACCTTGATTCTATCGGTGGCAAAGGGGGTGCCCTCTTGAGGGGGCTGAAGGAGAGTGCAGAGTCCGAAGACGCTCTATCCTTCCATAAGGCTAAACCCAAAAACCCAGATTTTCAGCACGATACCTACTCAGTCAGCTCCAGGAGAAAGTCCCAGGCAGGGGATGACATGAATGACAGAGAATCAGTCATCTCCCAGGCCTATTCAGAGGCCAACAGCCGAGCCAGGAAAGGCATGGACAGCCGCTGGGGGGACTTCGACAAAGAATCAGTCATTTCATACCCTGCACCAAGTCGGGCCTCCACGCGTCTTGGGTTAAGCCCAGAGAACGATGCCAAGTCTACCGTCAGCTTAGGTCTGTCAAGCCCACTTGGACGCCACCAAAGCACCTCGCGCTTAGATGAGGACAGAGGCAGGCGGTTGCTGTATGGCAGCAGTCCCAGTAGCCCTTGCTTTAGCAGACGGTCTGGAGGACGCAGTCCTGGAAGCGTTAGCCGAGCTGATTCCCATATGTCCCTGGGACGCAGCTGCCGCCTGAGTGAGTTTGACGTTGATATGGATGATAGTCGCAGTGTGGCCTTCACCGAGAGGTCGGCGTACAGTCCTCACTCGTCCACTGGCCGCAGTATCTCCATGCCACCACCACGGGCCCGATCATCAACTACTGATAATGACCCGATTGATACCTTGGATATCAAACCAGTCAGTCATCGCAACTACCTCGACCCTGACCTGGAGAAAGCCATCAATGAGGTGCTGAATTTCAAGCCGATCAAATTCAAGCGCAGGAGCTTGGAAGACTCAGagggtgaagaagaaaaatccAAGAATGAGAAGGACGACAGCAAAAGTATCAGCAATGGAGACGGACCTCGCCCTGCTAGCAGTCTTAGACGCTCCGCGTCGGCAGTGGACTGCATGAGAGCGTCCCGCAgcggcagcagctgcagcagtcgCCATCGCAGCAAGAGCAAAGGCAAgagcaagaagaagaagagaagccaCAGCTCCGAGTCAGACAGCTCAGGAGACGACCGTCGTCACAGGAGCAGCTCCAAGAGGAGGTCCAAAAAGTCCAAGAAAAAGTCCAAGAAGAGGGACAAATCTTCATCCTCTTCCTCGTCTTCTTCCTCTTCGGATTCCGAGTCGGACTCTGGATCAGAGTCTAGCTCCGGGGCTTCCACCATTTCCTACAGAAGCTCCAGCAGTGTGAAGAGGGCCCCGATTCGAAAGGTGTCCAGCCCAGAAGGGGAAGGAGAAGCTAGGCCACAGAGTGAGAGCCAGCCCCTTAACCCAAAGGACGataagaagaggaagaagaaggtggACAGCCTGATGATGAAGTACCTGTACCGGCCGGACAGTGACTGAGGCAGGCACCCCCCTGGCCGGAGACACTGCTTCGATAGatctgatgaagaggaggaggaagaagaaaaagaagaaggcgGGGCGACCCAGGGCTCTTACTACACCCGATGAAGACATGGCAGCCAAATGAAAGACGACGGCGGT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU32410 lncRNA downstream 26665 45469859 ~ 45470303 (-) True G24037
TU32409 lncRNA downstream 28583 45468162 ~ 45468385 (-) True G24036
TU32367 lncRNA downstream 158096 45338506 ~ 45338872 (-) True G23996
TU32361 lncRNA downstream 165970 45330732 ~ 45330998 (-) True G23990
TU32357 lncRNA downstream 178086 45318607 ~ 45318882 (-) True G23986
XR_005637962.1 lncRNA upstream 114153 45774212 ~ 45775139 (-) False LOC120552149
TU32528 lncRNA upstream 114153 45774212 ~ 45775197 (-) True LOC120552149
TU32702 lncRNA upstream 524460 46184519 ~ 46184757 (-) True G24264
TU32710 lncRNA upstream 676287 46336346 ~ 46336574 (-) True G24272
TU32714 lncRNA upstream 752516 46412575 ~ 46412774 (-) True G24276
XM_039778005.1 mRNA downstream 181101 44987963 ~ 45315867 (-) False sez6b
XM_039777999.1 mRNA downstream 181101 45007153 ~ 45315867 (-) False sez6b
XM_039777990.1 mRNA downstream 181101 45007153 ~ 45315867 (-) True sez6b
XM_039777980.1 mRNA downstream 510342 44968198 ~ 44986626 (-) True phf12b
XM_039788116.1 mRNA downstream 671981 44816628 ~ 44824987 (-) True mrps23
XM_039786090.1 mRNA upstream 5321 45665380 ~ 45681164 (-) True LOC120549281
XM_039784695.1 mRNA upstream 35143 45695202 ~ 45767319 (-) True LOC120548432
XM_039784702.1 mRNA upstream 35143 45695202 ~ 45767318 (-) False LOC120548432
XM_039784716.1 mRNA upstream 35143 45695202 ~ 45745406 (-) False LOC120548432
XM_039784707.1 mRNA upstream 35143 45695202 ~ 45735938 (-) False LOC120548432
unassigned_transcript_136 other downstream 570512 44926385 ~ 44926456 (-) True trnah-gug_5
unassigned_transcript_135 other downstream 570809 44926087 ~ 44926159 (-) True trnah-aug
unassigned_transcript_134 other downstream 571410 44925487 ~ 44925558 (-) True trnah-gug_4
unassigned_transcript_133 other downstream 571708 44925188 ~ 44925260 (-) True trnar-acg_8
unassigned_transcript_132 other downstream 574355 44922541 ~ 44922613 (-) True trnar-acg_7
TU32961 other upstream 1474798 47134857 ~ 47142549 (-) False bet1l

Expression Profile