Item | Value |
---|---|
RNA id | TCONS_00006752 |
length | 812 |
RNA type | mRNA |
GC content | 0.51 |
exon number | 7 |
gene id | XLOC_003450 |
representative | False |
Item | Value |
---|---|
chromosome id | NC_007122.7 |
NCBI id | CM002895.2 |
chromosome length | 45484837 |
location | 24716837 ~ 24756816 (+) |
genome version | GRCz11_2017_zebrafish_Genome |
species | zebrafish (Danio rerio) |
id | name | namespace |
---|---|---|
GO:0045087 | innate immune response | biological_process |
GO:0031398 | positive regulation of protein ubiquitination | biological_process |
GO:0034334 | adherens junction maintenance | biological_process |
GO:0005575 | cellular_component | cellular_component |
GO:0003674 | molecular_function | molecular_function |
id | description |
---|---|
ZDB-GENE-061103-190 | Predicted to be involved in adherens junction maintenance and positive regulation of protein ubiquitination. Predicted to be located in cytoplasm. Human ortholog(s) of this gene implicated in inflammatory bowel disease 29. Orthologous to human INAVA (innate immunity activator). |
ensembl_id | ENSDART00000145217 |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TCONS_00006744 | lncRNA | upstream | 372533 | 24343328 ~ 24344304 (+) | False | XLOC_003446 |
TCONS_00008611 | lncRNA | upstream | 372821 | 24339396 ~ 24344016 (+) | False | XLOC_003446 |
TCONS_00006743 | lncRNA | upstream | 372821 | 24343010 ~ 24344016 (+) | False | XLOC_003446 |
TCONS_00006741 | lncRNA | upstream | 373644 | 24340031 ~ 24343193 (+) | False | XLOC_003446 |
TCONS_00006737 | lncRNA | upstream | 375915 | 24339393 ~ 24340922 (+) | False | XLOC_003446 |
TCONS_00006773 | lncRNA | downstream | 156447 | 24900479 ~ 24905875 (+) | False | XLOC_003459 |
TCONS_00008401 | lncRNA | downstream | 315430 | 25059462 ~ 25060098 (+) | True | XLOC_003463 |
TCONS_00008612 | lncRNA | downstream | 437825 | 25181857 ~ 25189277 (+) | False | XLOC_003466 |
TCONS_00008613 | lncRNA | downstream | 438060 | 25182092 ~ 25228195 (+) | False | XLOC_003466 |
TCONS_00008614 | lncRNA | downstream | 467624 | 25211656 ~ 25228195 (+) | False | XLOC_003466 |
TCONS_00006751 | mRNA | upstream | 12400 | 24703108 ~ 24704437 (+) | True | XLOC_003449 |
TCONS_00006748 | mRNA | upstream | 52806 | 24620818 ~ 24664031 (+) | False | XLOC_003448 |
TCONS_00006750 | mRNA | upstream | 53610 | 24639743 ~ 24663227 (+) | True | XLOC_003448 |
TCONS_00006749 | mRNA | upstream | 54052 | 24639743 ~ 24662785 (+) | False | XLOC_003448 |
TCONS_00006747 | mRNA | upstream | 58343 | 24620742 ~ 24658494 (+) | False | XLOC_003448 |
TCONS_00006754 | mRNA | downstream | 14935 | 24758967 ~ 24783118 (+) | False | XLOC_003451 |
TCONS_00006755 | mRNA | downstream | 15047 | 24759079 ~ 24779596 (+) | True | XLOC_003451 |
TCONS_00006756 | mRNA | downstream | 42346 | 24786378 ~ 24799675 (+) | True | XLOC_003452 |
TCONS_00006757 | mRNA | downstream | 56124 | 24800156 ~ 24814537 (+) | False | XLOC_003453 |
TCONS_00006759 | mRNA | downstream | 60524 | 24804556 ~ 24815193 (+) | False | XLOC_003453 |
TCONS_00006746 | other | upstream | 135723 | 24580579 ~ 24581114 (+) | True | XLOC_003447 |
TCONS_00006731 | other | upstream | 371414 | 24339362 ~ 24345423 (+) | False | XLOC_003446 |
TCONS_00006769 | other | downstream | 137277 | 24881309 ~ 24883345 (+) | True | XLOC_003457 |
TCONS_00006774 | other | downstream | 157846 | 24901878 ~ 24903210 (+) | True | XLOC_003459 |
TCONS_00006779 | other | downstream | 236887 | 24980919 ~ 24983498 (+) | True | XLOC_003460 |
TCONS_00006781 | other | downstream | 250701 | 24994733 ~ 25025497 (+) | False | XLOC_003461 |
TCONS_00006782 | other | downstream | 265611 | 25009643 ~ 25025592 (+) | False | XLOC_003461 |