Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039792355.1 |
| length | 1337 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 1 |
| gene id | LOC120553687 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053113.1 |
| NCBI id | CM020910.1 |
| chromosome length | 48524041 |
| location | 14480803 ~ 14482139 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0005886 | plasma membrane | cellular_component |
| GO:0005923 | bicellular tight junction | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005198 | structural molecule activity | molecular_function |
| id | description |
|---|---|
| K06087 | CLDN; claudin |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU23194 | lncRNA | upstream | 30157 | 14449481 ~ 14450646 (+) | True | G16984 |
| TU23189 | lncRNA | upstream | 45269 | 14435222 ~ 14435534 (+) | True | G16980 |
| TU23188 | lncRNA | upstream | 46074 | 14434417 ~ 14434729 (+) | True | G16979 |
| TU23187 | lncRNA | upstream | 46594 | 14433605 ~ 14434209 (+) | True | G16978 |
| TU23184 | lncRNA | upstream | 60048 | 14420458 ~ 14420755 (+) | True | G16975 |
| TU23281 | lncRNA | downstream | 155290 | 14637429 ~ 14638924 (+) | False | LOC120547056 |
| TU23394 | lncRNA | downstream | 657027 | 15139166 ~ 15139536 (+) | True | G17131 |
| TU23435 | lncRNA | downstream | 903324 | 15385463 ~ 15386345 (+) | True | G17159 |
| TU23479 | lncRNA | downstream | 955032 | 15437171 ~ 15467407 (+) | False | LOC120572787 |
| TU23572 | lncRNA | downstream | 1202983 | 15685122 ~ 15685331 (+) | True | G17274 |
| XM_039792343.1 | mRNA | upstream | 9527 | 14470039 ~ 14471276 (+) | True | LOC120553681 |
| XM_039792442.1 | mRNA | upstream | 16413 | 14463652 ~ 14464390 (+) | True | LOC120553742 |
| XM_039792295.1 | mRNA | upstream | 60832 | 14416350 ~ 14419971 (+) | True | sbds |
| XM_039790054.1 | mRNA | upstream | 236065 | 14225405 ~ 14244738 (+) | True | galnt17 |
| XM_039789733.1 | mRNA | upstream | 266560 | 14205349 ~ 14214243 (+) | False | rhbdd1 |
| XM_039821102.1 | mRNA | downstream | 19796 | 14501935 ~ 14519927 (+) | True | gipr |
| XM_039821108.1 | mRNA | downstream | 19796 | 14501935 ~ 14519927 (+) | False | gipr |
| XM_039789606.1 | mRNA | downstream | 88627 | 14570766 ~ 14579871 (+) | False | LOC120551997 |
| XM_039789615.1 | mRNA | downstream | 88627 | 14570766 ~ 14579871 (+) | False | LOC120551997 |
| XM_039789619.1 | mRNA | downstream | 88627 | 14570766 ~ 14579871 (+) | False | LOC120551997 |
| TU23190 | other | upstream | 39110 | 14436047 ~ 14441693 (+) | True | G16981 |
| TU23191 | other | upstream | 39110 | 14436047 ~ 14441693 (+) | False | G16981 |
| TU22889 | other | upstream | 918388 | 13556279 ~ 13562415 (+) | True | G16788 |
| XR_005641732.1 | other | upstream | 1343769 | 13107862 ~ 13137034 (+) | False | hif1al |
| unassigned_transcript_90 | other | upstream | 1477396 | 13003335 ~ 13003407 (+) | True | trnak-uuu_4 |
| TU23312 | other | downstream | 276128 | 14758267 ~ 14760824 (+) | False | rasgrp4 |
| TU23488 | other | downstream | 983564 | 15465703 ~ 15542486 (+) | True | G17201 |
| TU23612 | other | downstream | 1341552 | 15823691 ~ 15832614 (+) | False | LOC120553974 |
| TU23613 | other | downstream | 1341552 | 15823691 ~ 15832704 (+) | False | LOC120553974 |
| TU23615 | other | downstream | 1341552 | 15823691 ~ 15832704 (+) | False | LOC120553974 |
