Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039792908.1 |
| length | 930 |
| RNA type | mRNA |
| GC content | 0.40 |
| exon number | 1 |
| gene id | LOC120554189 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053113.1 |
| NCBI id | CM020910.1 |
| chromosome length | 48524041 |
| location | 38781302 ~ 38782231 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0007186 | G protein-coupled receptor signaling pathway | biological_process |
| GO:0050911 | detection of chemical stimulus involved in sensory perception of smell | biological_process |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0004930 | G protein-coupled receptor activity | molecular_function |
| GO:0004984 | olfactory receptor activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU30659 | lncRNA | downstream | 52337 | 38727604 ~ 38728965 (-) | False | LOC120570635 |
| TU30607 | lncRNA | downstream | 428716 | 38352382 ~ 38352586 (-) | True | G22520 |
| XR_005642040.1 | lncRNA | downstream | 429982 | 38303806 ~ 38351320 (-) | True | LOC120575673 |
| TU30523 | lncRNA | downstream | 871184 | 37906362 ~ 37910118 (-) | True | G22462 |
| TU30517 | lncRNA | downstream | 877621 | 37902256 ~ 37903681 (-) | True | G22458 |
| TU30671 | lncRNA | upstream | 31548 | 38813779 ~ 38814207 (-) | True | G22563 |
| TU30683 | lncRNA | upstream | 102996 | 38885227 ~ 38885642 (-) | True | G22575 |
| TU30687 | lncRNA | upstream | 124005 | 38906236 ~ 38906709 (-) | True | G22579 |
| TU30699 | lncRNA | upstream | 170783 | 38953014 ~ 38953369 (-) | True | G22591 |
| TU30744 | lncRNA | upstream | 260858 | 39043089 ~ 39043421 (-) | False | G22629 |
| XM_039820926.1 | mRNA | downstream | 10694 | 38767545 ~ 38770608 (-) | True | pgap2 |
| XM_039820919.1 | mRNA | downstream | 11234 | 38767545 ~ 38770068 (-) | False | pgap2 |
| XM_039779479.1 | mRNA | downstream | 16264 | 38736165 ~ 38765038 (-) | False | stim1a |
| XM_039779471.1 | mRNA | downstream | 16264 | 38736165 ~ 38765038 (-) | True | stim1a |
| XM_039779486.1 | mRNA | downstream | 16266 | 38738751 ~ 38765036 (-) | False | stim1a |
| XM_039789378.1 | mRNA | upstream | 55968 | 38838199 ~ 38839088 (-) | True | LOC120551793 |
| XM_039785793.1 | mRNA | upstream | 101267 | 38883498 ~ 38885224 (-) | True | LOC120549135 |
| XM_039781193.1 | mRNA | upstream | 198114 | 38980345 ~ 38997012 (-) | False | LOC120546317 |
| XM_039781183.1 | mRNA | upstream | 198114 | 38980345 ~ 38997012 (-) | True | LOC120546317 |
| XM_039781680.1 | mRNA | upstream | 226208 | 39008439 ~ 39011326 (-) | True | hmgb1b |
| XR_005641089.1 | other | downstream | 45479 | 38728941 ~ 38735823 (-) | False | LOC120570635 |
| TU30601 | other | downstream | 417614 | 38353060 ~ 38363688 (-) | False | robo2 |
| XR_005637810.1 | other | downstream | 1035032 | 37734865 ~ 37746270 (-) | False | p4ha3 |
| XR_005636371.1 | other | downstream | 1125507 | 37651459 ~ 37655795 (-) | True | si:ch211-105f12.2 |
| TU30252 | other | downstream | 1511982 | 37264573 ~ 37269320 (-) | True | G22245 |
| TU31014 | other | upstream | 1243651 | 40025882 ~ 40033156 (-) | False | LOC120546248 |
| unassigned_transcript_105 | other | upstream | 2249575 | 41031806 ~ 41031878 (-) | True | trnak-uuu_7 |
| XR_005641814.1 | other | upstream | 4454451 | 43236682 ~ 43346673 (-) | True | LOC120574039 |
| XR_005641815.1 | other | upstream | 4454451 | 43236682 ~ 43346664 (-) | False | LOC120574039 |
| unassigned_transcript_106 | other | upstream | 4745623 | 43527854 ~ 43527925 (-) | True | trnaa-ugc |
