RNA id: XM_039822738.1


Basic Information

Item Value
RNA id XM_039822738.1
length 1243
RNA type mRNA
GC content 0.45
exon number 4
gene id il15l
representative True

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 409173 ~ 461344 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GGAGAGtgacagaagagagaggctcTCTGATAAAAGAACTGAGACCAGAAATCAGCCACCGGTGGAGGGAAACTTTTCtatttcttctccttctttttcTGCAGTTTTTGGGGAGTTACTGCACTGATCTGCTTTCACAGTTAAACAGGTGAACTGAAGAGCCACATGAACTTGTTGAAACACTTGATGCAATTTGGTTTTTGGGTGGTTTTTCGGattgcattgcattttttttttcttctaatttagctccaagtttttattttttatttttatgtaatccGGTCCTGCTGCTGATCATCTGACTTGCCAATTTGGAATAACCCTTCATGGAGACTTTTTAGACCCCTACTTTTTGGAGCCATTTTTTCAAGTGTATCGCTTCTGCACCCAAAACTGACTGAACTTACTGACTGATCTCTCTGTTCTCAGCTGCATGTCAACACGCGCTGGAGGCTGAAGAAGAAAAGCTCGCTGTGAAGCACTTCTCAACCTGGTCTGGGGATTTCAAACCACTCTCGTAGGATTACAAGAAGATTGGGTGGAACTCCTCTTAACATGGACTTCAAATCAGCAGCGGACTTTAAGGGTGATGACGAATAATCGAGGTTGTTCCTCTCCATGAGCATGCCGTAGTGCGACACAGCAGtggatgatgtgatgatggttCTGCTGCCCGTGCCATGCTGAGAGGGAGGTTAGCTCTCGCGAGTGTGTATCTGTTTTTCGTCTGTCTGCTCGGACTGATGCACCAATCAGCCGCCAGAGCCTGCTCTCCAGACACCCTCACAAAGGTCCGGAATCTCATCACAGAAACTCCAGCCATGAAAGAGAAGTTGAACTGCAGTCTGTACACGCCCACCGCCCAAGACTACAAGcagaCATGCCCTAAGTCCACCCTGAAATGTTTCACTAACGAAACCAAAGTTCTCATTGAAGAGTGGGTGGCCATCAATTTCGGACCCATCAGCACCTTGAGAAAAGTCCACAGGAATCTTCAAATTCTATCAGCAAAGTTTAACCAGCCGGAGTCAGAGTGCCGTCAGTGTGAATTCCTCAACGAGAAAAATGCAGAAGAGTTCCTGGAGCAACTTGCGGTGACTCTTCAGACGATGAACTCTGAGTACTGCTAAGGACTTaaggactttaaaaaaaaaaaaaaagacacttcatTACCTTTTTCTCCTCTTCATGAACTTTTCATATCACCTGAACACGAATAAAGTGCGCCATGCAAGATGTC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU17489 lncRNA downstream 29394 376773 ~ 379779 (-) True G13140
TU17485 lncRNA downstream 87983 317728 ~ 321190 (-) True G13136
TU17483 lncRNA downstream 115075 293819 ~ 294098 (-) True G13134
TU17478 lncRNA downstream 132696 258011 ~ 276477 (-) True G13130
TU17592 lncRNA upstream 53142 477071 ~ 536982 (-) True G13211
TU17574 lncRNA upstream 92540 516469 ~ 550756 (-) False G13206
TU17573 lncRNA upstream 92815 516744 ~ 550756 (-) False G13206
TU17576 lncRNA upstream 126089 550018 ~ 550756 (-) False G13206
TU17575 lncRNA upstream 126319 550248 ~ 550756 (-) True G13206
XM_039778484.1 mRNA downstream 24985 310607 ~ 384188 (-) True supt5h
XM_039791647.1 mRNA downstream 212884 186389 ~ 196289 (-) True chp2
XM_039778471.1 mRNA downstream 258941 119555 ~ 150232 (-) True LOC120544598
XM_039786679.1 mRNA downstream 306818 86153 ~ 102355 (-) True dlc
XM_039778457.1 mRNA downstream 372349 7487 ~ 36824 (-) True cep43
XM_039822798.1 mRNA upstream 49624 473553 ~ 713695 (-) False plekhg2
XM_039822818.1 mRNA upstream 49624 473553 ~ 713694 (-) False plekhg2
XM_039822788.1 mRNA upstream 49624 473553 ~ 713694 (-) False plekhg2
XM_039822807.1 mRNA upstream 49624 473553 ~ 713694 (-) False plekhg2
XM_039822779.1 mRNA upstream 49624 473553 ~ 713694 (-) False plekhg2
TU17557 other downstream 21789 386401 ~ 387384 (-) True G13195
TU17487 other downstream 25007 361387 ~ 384166 (-) False supt5h
TU17469 other downstream 83974 309150 ~ 325199 (-) True G13128
TU17381 other downstream 258999 135644 ~ 150174 (-) False LOC120544598
unassigned_transcript_79 other upstream 229775 653704 ~ 653795 (-) True trnar-ucu_7
unassigned_transcript_80 other upstream 241404 665333 ~ 665426 (-) True trnar-ucu_8
TU17622 other upstream 309339 733268 ~ 736542 (-) True G13228
TU17625 other upstream 316529 740458 ~ 747759 (-) False si:ch211-137a8.2
TU17626 other upstream 316529 740458 ~ 750503 (-) False si:ch211-137a8.2

Expression Profile