RNA id: XR_005641431.1



Basic Information


Item Value
RNA id XR_005641431.1
length 193
lncRNA type intronic
GC content 0.50
exon number 3
gene id LOC120572359
representative True

Chromosome Information


Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 22794426 ~ 22795639 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


AATTGGCTCCAAACATTTGTGGTGCCACAAATCCCCCATCCACAATTGATGATACTGAAGAGCTGACCACTGAGAGCAAGTGCATCCATACAGCTGTCAGCCACCCAAATCAGACCAGTCCAGAGCTCGGCCCTCTCACCAAGGCCCTTGATGACAAATTGGCTCCAAACATTTGTGGTGCCACAAATCCCCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU25750 lncRNA downstream 14649 22777736 ~ 22779777 (-) True G18837
XR_005637251.1 lncRNA downstream 158016 22635577 ~ 22636410 (-) True LOC120548681
TU25713 lncRNA downstream 361464 22432553 ~ 22432962 (-) True G18810
TU25706 lncRNA downstream 429931 22364271 ~ 22364495 (-) True G18803
TU25698 lncRNA downstream 508217 22283003 ~ 22286209 (-) True G18795
TU25755 lncRNA upstream 20142 22815781 ~ 22815980 (-) True G18841
TU25794 lncRNA upstream 249110 23044749 ~ 23120934 (-) True G18868
TU25810 lncRNA upstream 342011 23137650 ~ 23138259 (-) True G18883
TU25824 lncRNA upstream 360302 23155941 ~ 23156504 (-) True G18896
TU25836 lncRNA upstream 379825 23175464 ~ 23175714 (-) True G18905
XM_039821718.1 mRNA downstream 441844 22347311 ~ 22352582 (-) True smtla
XM_039790240.1 mRNA downstream 560652 22200393 ~ 22233774 (-) False fli1
XM_039821365.1 mRNA upstream 65312 22860951 ~ 22871590 (-) True barx2
XM_039790989.1 mRNA upstream 79426 22875065 ~ 22882453 (-) True rbm7
XM_039780872.1 mRNA upstream 363657 23159296 ~ 23162078 (-) True LOC120546095
XM_039780884.1 mRNA upstream 366563 23162202 ~ 23169207 (-) True lbhl
XM_039782027.1 mRNA upstream 482963 23278602 ~ 23283802 (-) True cfap45
TU25608 other downstream 787255 22001904 ~ 22007171 (-) False LOC120551419
TU25499 other downstream 1122947 21664095 ~ 21671479 (-) False gdpd5b
TU25281 other downstream 1532503 21246839 ~ 21261923 (-) False slc6a4a
TU25187 other downstream 1697225 21094182 ~ 21097201 (-) True si:ch1073-340i21.1
TU25100 other downstream 2652914 20137342 ~ 20141512 (-) False LOC120547993
TU25812 other upstream 343574 23139213 ~ 23148515 (-) True G18885
TU25813 other upstream 343761 23139400 ~ 23148515 (-) False G18885
TU25890 other upstream 450964 23246603 ~ 23252420 (-) True G18948
XR_005641870.1 other upstream 933849 23729488 ~ 23758826 (-) False atm
TU26143 other upstream 1028182 23823821 ~ 23827954 (-) True G19140

Expression Profile